RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ZNFX1Q9P2E3 1918 aaKnown RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 SDHDO14521 159 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 NRASP01111 189 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 HRASP01112 189 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 KRASP01116 189 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 CTXN2P0C2S0 81 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 IL3RAP26951 378 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 HTR1FP30939 366 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 FCGR2CP31995 323 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 ELLP55199 621 aaPredicted RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 SLC35A1P78382 337 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 Q5PR19 223 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 TMED6Q8WW62 240 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 INPP5KQ9BT40 448 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 TRAV36DV7A0A075B6V5 113 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 RAB29O14966 203 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 PPP1R3DO95685 299 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 CA3P07451 260 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 OR4E1P0C645 316 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 FAM87AP0C7U9 286 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 KCNA6P17658 529 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 RPL12P30050 165 aaKnown RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 UQCRFS1P47985 274 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 CNN1P51911 297 aaKnown RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 LTB4RQ15722 352 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 CDC42EP5Q6NZY7 148 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 ILDR1Q86SU0 546 aaPredicted RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 OR6K2Q8NGY2 324 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 SEH1LQ96EE3 360 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 ADARB2Q9NS39 739 aaKnown RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 MUTYHQ9UIF7 546 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 A6NL46 340 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 AHSGP02765 367 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 OR2T7P0C7T2 308 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 TACR2P21452 398 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 TCL1AP56279 114 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 TMEM123Q8N131 208 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 PRSS3P2Q8NHM4 247 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 PINX1Q96BK5 328 aaKnown RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 DTD2Q96FN9 168 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 SLC35E1Q96K37 410 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 SPAG8Q99932 426 aaPredicted RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 USP32Q8NFA0 1604 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 GLI2P10070 1586 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 VAMP5O95183 116 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 HAND1O96004 215 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 GNG10P50151 68 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 STC1P52823 247 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 SLC5A12Q1EHB4 618 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 MSS51Q4VC12 460 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 FAM74A3Q4VXF1 159 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 OR2B11Q5JQS5 317 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 SIRPB2Q5JXA9 342 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 ZNF626Q68DY1 528 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 DHRS7BQ6IAN0 325 aaPredicted RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 GALNT16Q8N428 558 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 NRG4Q8WWG1 115 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 TMEM37Q8WXS4 190 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 EMID1Q96A84 441 aaPredicted RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 AKT1S1Q96B36 256 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 GPR78Q96P69 363 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 LRRC3BQ96PB8 259 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 TMEM43Q9BTV4 400 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 TTYH3Q9C0H2 523 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 GABARAPL1Q9H0R8 117 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 GAL3ST2Q9H3Q3 398 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 RIMS3Q9UJD0 308 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 PREX2Q70Z35 1606 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 COL1A2P08123 1366 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 LMTK3Q96Q04 1460 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 A0A1W2PQH9 124 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 LRRC3CA6NJW4 275 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 ANHXE9PGG2 379 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 CELF2O95319 508 aaKnown RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 CEBPDP49716 269 aaPredicted RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 ERVS71-1P61550 626 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 FAM3AP98173 230 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 OR8J2Q8NGG1 315 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 DAZLQ92904 295 aaKnown RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 C1orf74Q96LT6 269 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 HEYLQ9NQ87 328 aaPredicted RBP8.13□□□□□ -1.11
LIG3-202ENST00000378526 DNAJB11Q9UBS4 358 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 SUSD2Q9UGT4 822 aa8.13□□□□□ -1.11
LIG3-202ENST00000378526 NFAT5O94916 1531 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 CLTCL1P53675 1640 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 OR4C45A6NMZ5 311 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 CDRT15L2A8MXV6 281 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 PEX12O00623 359 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 VEGFDO43915 354 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 ACTL6AO96019 429 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 CALCBP10092 127 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 FECHP22830 423 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 GZMKP49863 264 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 TAS2R60P59551 318 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 AESQ08117 197 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 TMEM267Q0VDI3 215 aaPredicted RBP8.12□□□□□ -1.11
LIG3-202ENST00000378526 SLC10A2Q12908 348 aaPredicted RBP8.12□□□□□ -1.11
LIG3-202ENST00000378526 CEACAM7Q14002 265 aa8.12□□□□□ -1.11
LIG3-202ENST00000378526 PCBP2Q15366 365 aaKnown RBP eCLIP8.12□□□□□ -1.11
LIG3-202ENST00000378526 PRAMEF19Q5SWL8 479 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms