RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 PARP4Q9UKK3 1724 aaKnown RBP4.54□□□□□ -1.68
PCDH9-201ENST00000377861 hCG_1809904A0A1W2PP81 198 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 A0A1W2PPE2 198 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 A0A1W2PR64 198 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 A0A1W2PRV1 198 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 PRSS42Q7Z5A4 293 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 INPP5KQ9BT40 448 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 PRSS37A4D1T9 235 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 KLKB1P03952 638 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 PEX12O00623 359 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 OPN1MWP04001 364 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 OPN1MW2P0DN77 364 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 OPN1MW3P0DN78 364 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 VAX1Q5SQQ9 334 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM106AQ96A25 262 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 CSF3RQ99062 836 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 NKX3-1Q99801 234 aaPredicted RBP4.54□□□□□ -1.68
PCDH9-201ENST00000377861 ACTR3CQ9C0K3 210 aaPredicted RBP4.54□□□□□ -1.68
PCDH9-201ENST00000377861 CA10Q9NS85 328 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 SIGLEC7Q9Y286 467 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 ELOA3CA0A087WX78 387 aaPredicted RBP4.54□□□□□ -1.68
PCDH9-201ENST00000377861 SMIM6P0DI80 62 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 VAMP1P23763 118 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 CRYBG1Q9Y4K1 1723 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 PTH2RP49190 550 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 TPMTP51580 245 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 PHOSPHO1Q8TCT1 267 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 OR4K15Q8NH41 348 aa4.54□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF101Q8IZC7 436 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SCARF2Q96GP6 870 aaPredicted RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 FBXW2Q9UKT8 454 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 PPIEQ9UNP9 301 aaKnown RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 CYP8B1Q9UNU6 501 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 LILRA5A6NI73 299 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 PLGP00747 810 aaPredicted RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 CAV2P51636 162 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM184AQ6ZMB5 413 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MOB1BQ7L9L4 216 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 C11orf54Q9H0W9 315 aaPredicted RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 NECAP2Q9NVZ3 263 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 BCL6P41182 706 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ZP4Q12836 540 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TMED4Q7Z7H5 227 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ARHGDIGQ99819 225 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MMP26Q9NRE1 261 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TBX21Q9UL17 535 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MTX2O75431 263 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ALOX5APP20292 161 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 LRFN4Q6PJG9 635 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 LSRQ86X29 649 aaPredicted RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 DSPPQ9NZW4 1301 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 FADS1O60427 444 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SULT1A3P0DMM9 295 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SULT1A4P0DMN0 295 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 LTBQ06643 244 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MRM1Q6IN84 353 aaKnown RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 NDRG1Q92597 394 aaKnown RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 DEFB126Q9BYW3 111 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TRBV4-1A0A0J9YWV2 114 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 GZMMP51124 257 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ARF5P84085 180 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 FGL2Q14314 439 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 GRIN2CQ14957 1233 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 PLEKHJ1Q9NW61 149 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ANKRD20A5PA0PJZ0 165 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 IFNL4K9M1U5 179 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 APLNRP35414 380 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SLC38A6Q8IZM9 456 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MITD1Q8WV92 249 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 KIRREL1Q96J84 757 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 CHST8Q9H2A9 424 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TRAV18A0A075B6X5 111 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TSPAN7P41732 249 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 RAB38P57729 211 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ALG14Q96F25 216 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ANGPTL4Q9BY76 406 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 RHCGQ9UBD6 479 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TOPAZ1Q8N9V7 1692 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MPDU1O75352 247 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SLC25A6P12236 298 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 OR1E2P47887 323 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 PLGLB1Q02325 96 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MRPL52Q86TS9 123 aaKnown RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 WDR31Q8NA23 367 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 OTOSQ8NHW6 89 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 GPR173Q9NS66 373 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SDR9C7Q8NEX9 313 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM185AQ8NFB2 350 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MICU1Q9BPX6 476 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SLC46A2Q9BY10 475 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ABI3BPQ7Z7G0 1075 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF366Q8N895 744 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 OR10K1Q8NGX5 313 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TREM1Q9NP99 234 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ACVR1BP36896 505 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ADGRE4PQ86SQ3 457 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM151BQ8IW70 566 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 NINJ1Q92982 152 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 RPL10LQ96L21 214 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms