RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 NKX2-5P52952 324 aaPredicted RBP12.52□□□□□ -0.41
GPC6-201ENST00000377047 ALKBH1Q13686 389 aaKnown RBP12.52□□□□□ -0.41
GPC6-201ENST00000377047 BCDIN3DQ7Z5W3 292 aaKnown RBP12.52□□□□□ -0.41
GPC6-201ENST00000377047 WFDC8Q8IUA0 241 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 OR4A16Q8NH70 328 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 OR51J1Q9H342 316 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 HRH3Q9Y5N1 445 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 SGCEO43556 437 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 ICOSLGO75144 302 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 IFNA10P01566 189 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 IL3RAP26951 378 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 RPL27P61353 136 aaKnown RBP12.52□□□□□ -0.41
GPC6-201ENST00000377047 ARHGAP11BQ3KRB8 267 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 STEAP3Q658P3 488 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 DUSP22Q9NRW4 184 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 TJP1Q07157 1748 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 TNRC6CQ9HCJ0 1690 aaKnown RBP12.51□□□□□ -0.41
GPC6-201ENST00000377047 M0R1B8 84 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 FZD7O75084 574 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 OR2J2O76002 312 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 IGLV3-25P01717 112 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 EIF4EP06730 217 aaKnown RBP12.51□□□□□ -0.41
GPC6-201ENST00000377047 ZGLP1P0C6A0 271 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 HTR1FP30939 366 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 Q6ZTK2 550 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 GDPD3Q7L5L3 318 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 S100A7AQ86SG5 101 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 BATF2Q8N1L9 274 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 UTP4Q969X6 686 aaKnown RBP12.51□□□□□ -0.41
GPC6-201ENST00000377047 SLC35A4Q96G79 324 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 CHST11Q9NPF2 352 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 RPH3ALQ9UNE2 315 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 RCE1Q9Y256 329 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 YBX2Q9Y2T7 364 aaKnown RBP12.51□□□□□ -0.41
GPC6-201ENST00000377047 PCDHGA5Q9Y5G8 931 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 A0A1W2PNR3 127 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 ANKRD33BA6NCL7 494 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 SLC2A1P11166 492 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 NDUFB7P17568 137 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 OR8G1Q15617 311 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 DUSP7Q16829 419 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 Q499Y3 187 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 ZFAND2BQ8WV99 257 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 SARAFQ96BY9 339 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 OR52A5Q9H2C5 316 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 PPA2Q9H2U2 334 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 PPT2Q9UMR5 302 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 CR2P20023 1033 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 TRIM23P36406 574 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 RAD52P43351 418 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 AGFG1P52594 562 aaKnown RBP12.51□□□□□ -0.41
GPC6-201ENST00000377047 HSF1Q00613 529 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 ILKQ13418 452 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 SAXO2Q658L1 398 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 SLC22A24Q8N4F4 322 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 C12orf45Q8N5I9 185 aaPredicted RBP12.51□□□□□ -0.41
GPC6-201ENST00000377047 KCNG3Q8TAE7 436 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 Q96M85 177 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 DCLRE1CQ96SD1 692 aaKnown RBP12.51□□□□□ -0.41
GPC6-201ENST00000377047 NIPSNAP1Q9BPW8 284 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 LAMB1P07942 1786 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 AGPAT2O15120 278 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 IL1AP01583 271 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 CEACAM5P06731 702 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 SNCAP37840 140 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 HEPHL1Q6MZM0 1159 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 SLC22A25Q6T423 547 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 TEX37Q96LM6 180 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 AP1S3Q96PC3 154 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 UBL7Q96S82 380 aaPredicted RBP12.51□□□□□ -0.41
GPC6-201ENST00000377047 NDUFAF4Q9P032 175 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 MDFIC2A0A1B0GVS7 189 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 TGM4P49221 684 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 RPS23P62266 143 aaKnown RBP12.51□□□□□ -0.41
GPC6-201ENST00000377047 TEKQ02763 1124 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 ACTBL2Q562R1 376 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 MAVSQ7Z434 540 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 SYT9Q86SS6 491 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 SLAMF9Q96A28 289 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 C7orf50Q9BRJ6 194 aaKnown RBP12.51□□□□□ -0.41
GPC6-201ENST00000377047 TAS2R16Q9NYV7 291 aa12.51□□□□□ -0.41
GPC6-201ENST00000377047 KLK10O43240 276 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 PRKNO60260 465 aaPredicted RBP12.5□□□□□ -0.41
GPC6-201ENST00000377047 KITLGP21583 273 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 FKBP2P26885 142 aaKnown RBP12.5□□□□□ -0.41
GPC6-201ENST00000377047 S100A7P31151 101 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 ZNF93P35789 620 aaPredicted RBP12.5□□□□□ -0.41
GPC6-201ENST00000377047 RUNX2Q13950 521 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 EXD3Q8N9H8 876 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 LRRC61Q9BV99 259 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
GPC6-201ENST00000377047 A8MXE2 369 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 GLCEO94923 617 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 DUSP2Q05923 314 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 FAPQ12884 760 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 OR7G2Q8NG99 324 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 SDF2Q99470 211 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 ZPBPQ9BS86 351 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 PLA2G2FQ9BZM2 168 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 NMNAT2Q9BZQ4 307 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms