RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 APOC3P02656 99 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 RLN2P04090 185 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 FBXO45P0C2W1 286 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 AQP2P41181 271 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 ARHGDIBP52566 201 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 SORDQ00796 357 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 RBMS2Q15434 407 aaKnown RBP12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 ZCCHC12Q6PEW1 402 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 BIVMQ86UB2 503 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 OR1E3Q8WZA6 343 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 ANKRD9Q96BM1 317 aaPredicted RBP12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 HEBP2Q9Y5Z4 205 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 COL4A2P08572 1712 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 CACNA1IQ9P0X4 2223 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 MPDZO75970 2070 aa12.84□□□□□ -0.35
CLCNKA-202ENST00000375692 TBC1D3DA0A087WVF3 549 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 TBC1D3IA0A087WXS9 549 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 OR6C74A6NCV1 312 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 URADA6NGE7 173 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 TBC1D3LB9A6J9 549 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 H0Y8X5 98 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 H7C1C5 153 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 H7C417 338 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 DCTN6O00399 190 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 ANXA2P07355 339 aaKnown RBP12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 TBC1D3HP0C7X1 549 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 SRFP11831 508 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 CALCRP30988 508 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 LSSP48449 732 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 LCN6P62502 163 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 ALKBH1Q13686 389 aaKnown RBP12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 TBC1D3CQ6IPX1 549 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 C11orf88Q6PI97 169 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 LRFN4Q6PJG9 635 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 ENPP7Q6UWV6 458 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 PDZD9Q8IXQ8 264 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 TBC1D3Q8IZP1 549 aaPredicted RBP12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 CAMKVQ8NCB2 501 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 OR51D1Q8NGF3 324 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 TNFAIP8L1Q8WVP5 186 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 CTHRC1Q96CG8 243 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 OR2M4Q96R27 311 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 MED11Q9P086 117 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 MTFP1Q9UDX5 166 aa12.83□□□□□ -0.35
CLCNKA-202ENST00000375692 OR2W5A6NFC9 320 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 SMAD9O15198 467 aaKnown RBP12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 OR10H2O60403 315 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 ADPRHP54922 357 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 SLC35D3Q5M8T2 416 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 C17orf107Q6ZR85 190 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 NSMAFQ92636 917 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 SPACA7Q96KW9 195 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 LDAHQ9H6V9 325 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 LYRM4Q9HD34 91 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 LRIT1Q9P2V4 623 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 IKZF2Q9UKS7 526 aa12.83□□□□□ -0.36
CLCNKA-202ENST00000375692 ARID1BQ8NFD5 2236 aaPredicted RBP12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 TRAV18A0A075B6X5 111 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 TCRBV21S2A2A0A5A6 115 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 H3BUI4 141 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 XRCC3O43542 346 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 HCRTR1O43613 425 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 SDC3O75056 442 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 GPANK1O95872 356 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 CTSBP07858 339 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 GTF2F2P13984 249 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 IL32P24001 234 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 ACTR1BP42025 376 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 TPMTP51580 245 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 ACTR1AP61163 376 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 C4orf46Q504U0 113 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 FAM74A1Q5RGS3 127 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 TSSK4Q6SA08 328 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 CDH26Q8IXH8 852 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 C10orf53Q8N6V4 93 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 OR5M9Q8NGP3 310 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 OR4C3Q8NH37 302 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 DUSP19Q8WTR2 217 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 CCDC74AQ96AQ1 378 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 MRPS24Q96EL2 167 aaKnown RBP12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 LRFN5Q96NI6 719 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 MFFQ9GZY8 342 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF230Q9UIE0 474 aaPredicted RBP12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 ARHGEF17Q96PE2 2063 aaPredicted RBP12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 MYO15AQ9UKN7 3530 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 A0A087WUJ7 227 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 A0A1B0GTQ1 180 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 D6RAR5 112 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 ARPC3O15145 178 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 CD3DP04234 171 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 F13BP05160 661 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF10P21506 573 aaPredicted RBP12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 MRPS21P82921 87 aaKnown RBP12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 UBXN2BQ14CS0 331 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 DNM1P46Q6ZS02 220 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 RNF44Q7L0R7 432 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 FAM220AQ7Z4H9 259 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 CA13Q8N1Q1 262 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms