RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ADH6P28332 368 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 ZNF750Q32MQ0 723 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 ADAM5Q6NVV9 412 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 STAC2Q6ZMT1 411 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 ZNF280BQ86YH2 543 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 OR2T27Q8NH04 317 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 TIFAQ96CG3 184 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 OTUB2Q96DC9 234 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 MALSU1Q96EH3 234 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 NEU1Q99519 415 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 SLC25A21Q9BQT8 299 aaPredicted RBP11.79□□□□□ -0.52
PRPF4-201ENST00000374198 STEAP1Q9UHE8 339 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 ZNF281Q9Y2X9 895 aa11.79□□□□□ -0.52
PRPF4-201ENST00000374198 TEX13DA0A0J9YY54 714 aaPredicted RBP11.78□□□□□ -0.52
PRPF4-201ENST00000374198 SLC38A8A6NNN8 435 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 C9JQL5 133 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 TMPRSS11DO60235 418 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 FGF19O95750 216 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 HOXB5P09067 269 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 HOXA5P20719 270 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 NCBP2P52298 156 aaKnown RBP eCLIP11.78□□□□□ -0.52
PRPF4-201ENST00000374198 AMZ1Q400G9 498 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 FNDC3BQ53EP0 1204 aaKnown RBP11.78□□□□□ -0.52
PRPF4-201ENST00000374198 LRRC73Q5JTD7 316 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 PRAMEF17Q5VTA0 474 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 DHRS11Q6UWP2 260 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 RHOUQ7L0Q8 258 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 TMCO2Q7Z6W1 182 aaPredicted RBP11.78□□□□□ -0.52
PRPF4-201ENST00000374198 ANGPTL5Q86XS5 388 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 OR4C6Q8NH72 309 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 ZBTB8AQ96BR9 441 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 ZNF764Q96H86 408 aaPredicted RBP11.78□□□□□ -0.52
PRPF4-201ENST00000374198 ACTRT3Q9BYD9 372 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 CYTL1Q9NRR1 136 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 ZNF223Q9UK11 482 aaPredicted RBP11.78□□□□□ -0.52
PRPF4-201ENST00000374198 SLC27A6Q9Y2P4 619 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 PPIL1Q9Y3C6 166 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 A0A0B4J2A0 478 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 CTSLP07711 333 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 ADRA2CP18825 462 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 HOXA6P31267 233 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 CD52P31358 61 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 POU3F4P49335 361 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 DEFB103AP81534 67 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 ZNF239Q16600 458 aaKnown RBP11.78□□□□□ -0.52
PRPF4-201ENST00000374198 NKPD1Q17RQ9 610 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 PNLIPRP3Q17RR3 467 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 ALG11Q2TAA5 492 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 ATPAF1Q5TC12 328 aaPredicted RBP11.78□□□□□ -0.52
PRPF4-201ENST00000374198 GABRG1Q8N1C3 465 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 OR4E2Q8NGC2 313 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 OR4K17Q8NGC6 315 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 PFN4Q8NHR9 129 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 ZMYND19Q96E35 227 aaPredicted RBP11.78□□□□□ -0.52
PRPF4-201ENST00000374198 SAT2Q96F10 170 aaPredicted RBP11.78□□□□□ -0.52
PRPF4-201ENST00000374198 MICU1Q9BPX6 476 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 FAM83CQ9BQN1 747 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 SULT4A1Q9BR01 284 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 CHST5Q9GZS9 411 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 NKX2-4Q9H2Z4 354 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 C20orf141Q9NUB4 165 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 SHPKQ9UHJ6 478 aa11.78□□□□□ -0.52
PRPF4-201ENST00000374198 CXorf65A6NEN9 183 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 IFITM10A6NMD0 228 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 YIF1AO95070 293 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 VNN2O95498 520 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 HLA-GP17693 338 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 NR0B2Q15466 257 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 NKAIN2Q5VXU1 208 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.77□□□□□ -0.533e-6■■■□□ 16.9
PRPF4-201ENST00000374198 GALNT16Q8N428 558 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 RGP1Q92546 391 aaPredicted RBP11.77□□□□□ -0.53
PRPF4-201ENST00000374198 S100PBPQ96BU1 408 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 SMIM8Q96KF7 97 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 PRSS27Q9BQR3 290 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 POTEKPQ9BYX7 375 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 LAMA3Q16787 3333 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 C7orf77A4D0Y5 90 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 FAM157AC9JC47 383 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 HLA-AP01891 365 aaKnown RBP11.77□□□□□ -0.53
PRPF4-201ENST00000374198 MYOGP15173 224 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 HIST1H1BP16401 226 aaKnown RBP11.77□□□□□ -0.53
PRPF4-201ENST00000374198 S100A2P29034 98 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 CD80P33681 288 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 PRSS3P35030 304 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 AQP2P41181 271 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 TAS2R38P59533 333 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 ANKRD16Q6P6B7 361 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 TMPRSS12Q86WS5 348 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 OR2AP1Q8NGE2 309 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 OR13C2Q8NGS9 318 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 CXorf40AQ8TE69 158 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 AKR1E2Q96JD6 320 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 MYADMQ96S97 322 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 LHX9Q9NQ69 397 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 CLDND1Q9NY35 253 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 B4GALT6Q9UBX8 382 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 PADI3Q9ULW8 664 aa11.77□□□□□ -0.53
PRPF4-201ENST00000374198 PRG3Q9Y2Y8 225 aaPredicted RBP11.77□□□□□ -0.53
PRPF4-201ENST00000374198 TRAV18A0A075B6X5 111 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms