RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 SLCO4A1Q96BD0 722 aa10.54□□□□□ -0.72
PTPRF-203ENST00000372407 UPRTQ96BW1 309 aa10.54□□□□□ -0.72
PTPRF-203ENST00000372407 RBMXL1Q96E39 390 aaKnown RBP10.54□□□□□ -0.72
PTPRF-203ENST00000372407 SEMA6CQ9H3T2 930 aa10.54□□□□□ -0.72
PTPRF-203ENST00000372407 WASH6PQ9NQA3 447 aa10.54□□□□□ -0.72
PTPRF-203ENST00000372407 SHPKQ9UHJ6 478 aa10.54□□□□□ -0.72
PTPRF-203ENST00000372407 LAMB1P07942 1786 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 CEBPZOSA8MTT3 80 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 MPPED1O15442 326 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 TNFSF12O43508 249 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 CXCL10P02778 98 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 DDOSTP39656 456 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 CCR6P51684 374 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 SLC35A1P78382 337 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 CCNL2Q96S94 520 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 STACQ99469 402 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 PDCD1LG2Q9BQ51 273 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 GSX2Q9BZM3 304 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 OR51B6Q9H340 312 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 TCEAL2Q9H3H9 227 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 KIR3DX1Q9H7L2 352 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 FBXO8Q9NRD0 319 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 DHCR7Q9UBM7 475 aaKnown RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 PRAMEF27A3QJZ7 478 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 TMEM202A6NGA9 273 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 SCRG1O75711 98 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 ZNF93P35789 620 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 BIDP55957 195 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 CLDN17P56750 224 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 IHHQ14623 411 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 DUSP5Q16690 384 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 SLC36A2Q495M3 483 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 ZNF684Q5T5D7 378 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 PRAMEF9Q5VWM5 478 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 OR5D18Q8NGL1 313 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 RNF141Q8WVD5 230 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 C3orf49Q96BT1 292 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 ZDHHC5Q9C0B5 715 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 PRMT8Q9NR22 394 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 TM7SF3Q9NS93 570 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 STEAP1Q9UHE8 339 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 TEX51A0A1B0GUA7 166 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 PMS2P2O95744 297 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 B3GALT4O96024 378 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 ARG2P78540 354 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 MFGE8Q08431 387 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 PDLIM3Q53GG5 364 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 WDR5BQ86VZ2 330 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 TAAR8Q969N4 342 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 ZNF775Q96BV0 537 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 ZNF845Q96IR2 970 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 ATP13A2Q9NQ11 1180 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 BET1O15155 118 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 KLK8O60259 260 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 CBX7O95931 251 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 LALBAP00709 142 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 CHRM2P08172 466 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 MSR1P21757 451 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 HSD17B7P56937 341 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 EEF1A2Q05639 463 aaKnown RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 LIPNQ5VXI9 398 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 RTN4RL1Q86UN2 441 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 MS4A6EQ96DS6 147 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 SLC6A18Q96N87 628 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 LYRM4Q9HD34 91 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 TMEM30AQ9NV96 361 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 HAO2Q9NYQ3 351 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 RAB22AQ9UL26 194 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 DAPP1Q9UN19 280 aa10.53□□□□□ -0.72
PTPRF-203ENST00000372407 TMEM184BQ9Y519 407 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-203ENST00000372407 ECM29Q5VYK3 1845 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 LOC100289279A0A1B0GTE1 492 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 TLCD2A6NGC4 264 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 OR6C65A6NJZ3 312 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 BCAT2O15382 392 aaPredicted RBP10.52□□□□□ -0.72
PTPRF-203ENST00000372407 TXNL1O43396 289 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 GMDSO60547 372 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 THBS1P07996 1170 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 DPP4P27487 766 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 SRPXP78539 464 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 CATR1Q13166 79 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 LPAL2Q16609 132 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 DUSP6Q16828 381 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 SOWAHCQ53LP3 525 aaPredicted RBP10.52□□□□□ -0.72
PTPRF-203ENST00000372407 PRAMEF20Q5VT98 475 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 SAXO2Q658L1 398 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 ACSM5Q6NUN0 579 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 LPCAT3Q6P1A2 487 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 NPSR1Q6W5P4 371 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 HAS2Q92819 552 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 MBOAT4Q96T53 435 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 SDF2Q99470 211 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 HINT3Q9NQE9 182 aaKnown RBP10.52□□□□□ -0.72
PTPRF-203ENST00000372407 C19orf53Q9UNZ5 99 aaPredicted RBP10.52□□□□□ -0.72
PTPRF-203ENST00000372407 ASB1Q9Y576 335 aa10.52□□□□□ -0.72
PTPRF-203ENST00000372407 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 CCDC163A0A0D9SF12 145 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 ZAR1LA6NP61 321 aa10.52□□□□□ -0.73
PTPRF-203ENST00000372407 H3BNC9 293 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms