RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ARPC4-TTLL3A0A0A6YYG9 625 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 ATP6V1G2-DDX39BF2Z307 99 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 SCRG1O75711 98 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 NDUFB6O95139 128 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 LYPD3O95274 346 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 ALDOBP05062 364 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 FGF5P12034 268 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 ZNF28P17035 718 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 PYCR1P32322 319 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 MC3RP41968 323 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 GDI2P50395 445 aaKnown RBP10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 DLX5P56178 289 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 OR12D2P58182 307 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 PSMA6P60900 246 aaKnown RBP10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 IL10RAQ13651 578 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 RTP5Q14D33 572 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 MPPED2Q15777 294 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 TUSC1Q2TAM9 212 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 MFSD12Q6NUT3 480 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 ZNF613Q6PF04 617 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 DNM1P46Q6ZS02 220 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 Q6ZTK2 550 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 HMGN2P46Q86SG4 172 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 CMTM4Q8IZR5 234 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 CSNK1A1LQ8N752 337 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 DTX3Q8N9I9 347 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 MFSD9Q8NBP5 474 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 THEM6Q8WUY1 208 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 ZG16BQ96DA0 208 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 ELMOD3Q96FG2 381 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 LINC00052Q96N35 136 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 TBX5Q99593 518 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 DPH1Q9BZG8 443 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 ULBP3Q9BZM4 244 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 DNTTIP1Q9H147 329 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 NOX3Q9HBY0 568 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 MED11Q9P086 117 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 RCE1Q9Y256 329 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 MRPS7Q9Y2R9 242 aaKnown RBP10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 MED31Q9Y3C7 131 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 WDR45Q9Y484 360 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 ATG4BQ9Y4P1 393 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 ETV7Q9Y603 341 aa10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 COL27A1Q8IZC6 1860 aaPredicted RBP10.43□□□□□ -0.74
TSPAN1-201ENST00000372003 SPTBN2O15020 2390 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 ACOT7O00154 380 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 ERI3O43414 337 aaKnown RBP10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 PTP4A3O75365 173 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 ZIC2O95409 532 aaPredicted RBP10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 AK1P00568 194 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 MAKP20794 623 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 DRD5P21918 477 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 SLC6A6P31641 620 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 FAUP35544 74 aaKnown RBP10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 ACVR1BP36896 505 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 VEGFCP49767 419 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 SEC61A1P61619 476 aaKnown RBP10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 STXBP1P61764 594 aaKnown RBP10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 SIRPAP78324 504 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 DUSP2Q05923 314 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 HLXQ14774 488 aaPredicted RBP10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 EXOSC6Q5RKV6 272 aaKnown RBP10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 FAM199XQ6PEV8 388 aaPredicted RBP10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 LINGO2Q7L985 606 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 VN1R4Q7Z5H5 301 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 PM20D2Q8IYS1 436 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 ZNF619Q8N2I2 560 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 BVESQ8NE79 360 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 LGALS14Q8TCE9 139 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 PNPLA2Q96AD5 504 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 S100A16Q96FQ6 103 aaKnown RBP10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 DDA1Q9BW61 102 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 HCAR1Q9BXC0 346 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 MED20Q9H944 212 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 ICAM5Q9UMF0 924 aa10.42□□□□□ -0.74
TSPAN1-201ENST00000372003 MDC1Q14676 2089 aaKnown RBP10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 UBE2QL1A1L167 161 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 IFITM5A6NNB3 132 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 H3BMH7 237 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 ARPC1BO15143 372 aaKnown RBP10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 P2RX6O15547 441 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 SUSD5O60279 629 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 GMDSO60547 372 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 FCMRO60667 390 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 STK17BO94768 372 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 NTN1O95631 604 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 GABRA1P14867 456 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 DPP4P27487 766 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 RBM34P42696 430 aaKnown RBP10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 GMFBP60983 142 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 RPS11P62280 158 aaKnown RBP eCLIP10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 CTAG1AP78358 180 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 LGALS3BPQ08380 585 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 BTN1A1Q13410 526 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 GRM7Q14831 915 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 OR1Q1Q15612 314 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 SLC35D3Q5M8T2 416 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 C1orf189Q5VU69 101 aa10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 SFRP4Q6FHJ7 346 aaPredicted RBP10.41□□□□□ -0.74
TSPAN1-201ENST00000372003 ZCCHC12Q6PEW1 402 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms