RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 LINGO2Q7L985 606 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 GRINAQ7Z429 371 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 ZNF676Q8N7Q3 588 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 CCDC74AQ96AQ1 378 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 COMMD4Q9H0A8 199 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 AUNIPQ9H7T9 357 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 OR4C45A6NMZ5 311 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 HLA-DQA2P01906 255 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 RNF4P78317 190 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 KLF9Q13886 244 aaPredicted RBP26.15■■□□□ 1.78
SSBP3-204ENST00000371320 ZFAND1Q8TCF1 268 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 SCMH1Q96GD3 660 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 MRI1Q9BV20 369 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 MED28Q9H204 178 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 SLC22A11Q9NSA0 550 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 ING1Q9UK53 422 aaPredicted RBP26.15■■□□□ 1.78
SSBP3-204ENST00000371320 SRPK3Q9UPE1 567 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 B9D1Q9UPM9 204 aa26.15■■□□□ 1.78
SSBP3-204ENST00000371320 PRSS37A4D1T9 235 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 ZNF432O94892 652 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 GDNFP39905 211 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 CENPAP49450 140 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 SNTB2Q13425 540 aaKnown RBP26.14■■□□□ 1.77
SSBP3-204ENST00000371320 DYRK1AQ13627 763 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 Q5BKY6 102 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 SLC22A10Q63ZE4 541 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 OTOSQ8NHW6 89 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 STT3BQ8TCJ2 826 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 DUSP15Q9H1R2 295 aaPredicted RBP26.14■■□□□ 1.77
SSBP3-204ENST00000371320 KCNG2Q9UJ96 466 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 FKBP7Q9Y680 259 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 A0A0C4DFX4 3053 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 SDK1Q7Z5N4 2213 aa26.14■■□□□ 1.77
SSBP3-204ENST00000371320 C7orf66A4D0T2 115 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 OR6A2O95222 327 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 ANKRD34CP0C6C1 535 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 ZNF519Q8TB69 540 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 SLCO1C1Q9NYB5 712 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 A6NL46 340 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 TMEM212A6NML5 194 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 DXOO77932 396 aaKnown RBP26.13■■□□□ 1.77
SSBP3-204ENST00000371320 MT-ND4P03905 459 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 CALCBP10092 127 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 CCR6P51684 374 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 LRRC69Q6ZNQ3 347 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 SERPINA12Q8IW75 414 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 AMELYQ99218 206 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 TGIF2Q9GZN2 237 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 GHITMQ9H3K2 345 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 OR5V1Q9UGF6 321 aa26.13■■□□□ 1.77
SSBP3-204ENST00000371320 ADRA2CP18825 462 aa26.12■■□□□ 1.77
SSBP3-204ENST00000371320 RASGEF1BQ0VAM2 473 aa26.12■■□□□ 1.77
SSBP3-204ENST00000371320 PTCRAQ6ISU1 281 aaPredicted RBP26.12■■□□□ 1.77
SSBP3-204ENST00000371320 RHBDD2Q6NTF9 364 aa26.12■■□□□ 1.77
SSBP3-204ENST00000371320 RELTQ969Z4 430 aa26.12■■□□□ 1.77
SSBP3-204ENST00000371320 S100A16Q96FQ6 103 aaKnown RBP26.12■■□□□ 1.77
SSBP3-204ENST00000371320 TRAF4Q9BUZ4 470 aaPredicted RBP26.12■■□□□ 1.77
SSBP3-204ENST00000371320 OR11A1Q9GZK7 315 aa26.12■■□□□ 1.77
SSBP3-204ENST00000371320 TXNIPQ9H3M7 391 aa26.12■■□□□ 1.77
SSBP3-204ENST00000371320 HSPB2A8KAH6 182 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 SMLR1H3BR10 107 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 ZNF593O00488 134 aaPredicted RBP26.11■■□□□ 1.77
SSBP3-204ENST00000371320 ZNF254O75437 659 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 TNK1Q13470 666 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 FCN2Q15485 313 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 HSPB2Q16082 182 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 COL28A1Q2UY09 1125 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 PWWP2BQ6NUJ5 590 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 C16orf47Q6ZP98 133 aaPredicted RBP26.11■■□□□ 1.77
SSBP3-204ENST00000371320 PRSS35Q8N3Z0 413 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 SYNPRQ8TBG9 265 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 GPR148Q8TDV2 347 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 FOXN4Q96NZ1 517 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 GTPBP2Q9BX10 602 aaKnown RBP26.11■■□□□ 1.77
SSBP3-204ENST00000371320 AKAP7Q9P0M2 348 aaPredicted RBP26.11■■□□□ 1.77
SSBP3-204ENST00000371320 ATXN7L1Q9ULK2 861 aaPredicted RBP26.11■■□□□ 1.77
SSBP3-204ENST00000371320 SLC16A7O60669 478 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 AHSA1O95433 338 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 STOMP27105 288 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 CXCL12P48061 93 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 ARRB1P49407 418 aaPredicted RBP26.11■■□□□ 1.77
SSBP3-204ENST00000371320 SHBQ15464 509 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 ODF4Q2M2E3 257 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 OTPQ5XKR4 325 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 LRRTM1Q86UE6 522 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 STK35Q8TDR2 534 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 DCBLD2Q96PD2 775 aa26.11■■□□□ 1.77
SSBP3-204ENST00000371320 PLPP3O14495 311 aa26.1■■□□□ 1.77
SSBP3-204ENST00000371320 RAF1P04049 648 aa26.1■■□□□ 1.77
SSBP3-204ENST00000371320 RAB40ALP0C0E4 278 aa26.1■■□□□ 1.77
SSBP3-204ENST00000371320 TMEM71Q6P5X7 295 aa26.1■■□□□ 1.77
SSBP3-204ENST00000371320 ZSCAN2Q7Z7L9 614 aaPredicted RBP26.1■■□□□ 1.77
SSBP3-204ENST00000371320 PLCZ1Q86YW0 608 aa26.1■■□□□ 1.77
SSBP3-204ENST00000371320 OR10AC1Q8NH08 325 aa26.1■■□□□ 1.77
SSBP3-204ENST00000371320 RAB40AQ8WXH6 277 aa26.1■■□□□ 1.77
SSBP3-204ENST00000371320 PLEKHA1Q9HB21 404 aa26.1■■□□□ 1.77
SSBP3-204ENST00000371320 VSX1Q9NZR4 365 aaPredicted RBP26.1■■□□□ 1.77
SSBP3-204ENST00000371320 FER1L5A0AVI2 2057 aa26.1■■□□□ 1.77
SSBP3-204ENST00000371320 TRBV5-7A0A0A0MS05 114 aa26.1■■□□□ 1.77
SSBP3-204ENST00000371320 SLC26A5P58743 744 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms