RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TMEM229AB2RXF0 380 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 ENTPD6O75354 484 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 MTRF1O75570 445 aaKnown RBP13.41□□□□□ -0.26
LMO4-201ENST00000370542 SERPINI2O75830 405 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 FAM157BP0CG42 384 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 ARAFP10398 606 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 BMP7P18075 431 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 DRD5P21918 477 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 GABRA5P31644 462 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 UQCRC1P31930 480 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 PPICP45877 212 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 EMDP50402 254 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 CRISP3P54108 245 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 RAG2P55895 527 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 WNT4P56705 351 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 RAB14P61106 215 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 DCAF7P61962 342 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 CDK6Q00534 326 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 ZNF91Q05481 1191 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 ZMAT1Q5H9K5 638 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 TOR2AQ5JU69 321 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 CD276Q5ZPR3 534 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 SLC30A6Q6NXT4 461 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 ADGRE4PQ86SQ3 457 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 SLC38A6Q8IZM9 456 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 C9orf62Q8N4C0 152 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 SLC37A3Q8NCC5 494 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 OR8H1Q8NGG4 311 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 LHFPL5Q8TAF8 219 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 OTULINQ96BN8 352 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 WDYHV1Q96HA8 205 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 OR2M2Q96R28 347 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 TSSK6Q9BXA6 273 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 MED28Q9H204 178 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 CXXC4Q9H2H0 198 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 CLEC4MQ9H2X3 399 aaPredicted RBP13.41□□□□□ -0.26
LMO4-201ENST00000370542 NMNAT1Q9HAN9 279 aaPredicted RBP13.41□□□□□ -0.26
LMO4-201ENST00000370542 DLL4Q9NR61 685 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 RLIMQ9NVW2 624 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 ALKBH4Q9NXW9 302 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 MPDZO75970 2070 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 ABCA4P78363 2273 aa13.41□□□□□ -0.26
LMO4-201ENST00000370542 DOCK7Q96N67 2140 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 STAB1Q9NY15 2570 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 KIAA1549Q9HCM3 1950 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 MBD3L4A6NDZ8 208 aaPredicted RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 MBD3L3A6NE82 208 aaPredicted RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 MBD3L5A6NJ08 208 aaPredicted RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 GCM2O75603 506 aaPredicted RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 RAF1P04049 648 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 LAMP1P11279 417 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 KLK2P20151 261 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 FEN1P39748 380 aaKnown RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 CRATP43155 626 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 EVX1P49640 407 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 ASCL1P50553 236 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 ZNF136P52737 540 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 RAE1P78406 368 aaKnown RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 HSF2Q03933 536 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 RAB40BQ12829 278 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 TRMT12Q53H54 448 aaKnown RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 DCST1Q5T197 706 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 LAMTOR1Q6IAA8 161 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 ZNF770Q6IQ21 691 aaPredicted RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 CD200R1LQ6Q8B3 271 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 CLECL1Q8IZS7 167 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 MBD3L2Q8NHZ7 208 aaPredicted RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 ZPLD1Q8TCW7 415 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 ZNF431Q8TF32 576 aaPredicted RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 NINJ1Q92982 152 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 RNASE6Q93091 150 aaKnown RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 KCTD12Q96CX2 325 aaKnown RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 UCN2Q96RP3 112 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 C7orf50Q9BRJ6 194 aaKnown RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 FAIM2Q9BWQ8 316 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 REEP4Q9H6H4 257 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 CALHM2Q9HA72 323 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 ASB6Q9NWX5 421 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 JKAMPQ9P055 326 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 PRODH2Q9UF12 536 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 FOXD3Q9UJU5 478 aaPredicted RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 EXO1Q9UQ84 846 aaKnown RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 RPH3AQ9Y2J0 694 aaPredicted RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 GPR55Q9Y2T6 319 aaPredicted RBP13.4□□□□□ -0.26
LMO4-201ENST00000370542 CDH10Q9Y6N8 788 aa13.4□□□□□ -0.26
LMO4-201ENST00000370542 PRRC2AP48634 2157 aaKnown RBP13.39□□□□□ -0.27
LMO4-201ENST00000370542 C7orf66A4D0T2 115 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 FRG2CA6NGY1 282 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 DVL2O14641 736 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 ICOSLGO75144 302 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 ERAL1O75616 437 aaKnown RBP13.39□□□□□ -0.27
LMO4-201ENST00000370542 IL18BPO95998 194 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 ACTL6AO96019 429 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 ANXA3P12429 323 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 CPN1P15169 458 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 GSTM3P21266 225 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 STOMP27105 288 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 TIA1P31483 386 aaKnown RBP eCLIP13.39□□□□□ -0.27
LMO4-201ENST00000370542 CRYBA2P53672 197 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 PCBP3P57721 371 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms