RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 OR10G2Q8NGC3 310 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 SLCO4A1Q96BD0 722 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 PIK3IP1Q96FE7 263 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 ZNF570Q96NI8 536 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 RAB3IPQ96QF0 476 aaPredicted RBP13.03□□□□□ -0.32
COL9A1-204ENST00000370496 GPA33Q99795 319 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 CLEC4MQ9H2X3 399 aaPredicted RBP13.03□□□□□ -0.32
COL9A1-204ENST00000370496 GLTPQ9NZD2 209 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 GRHPRQ9UBQ7 328 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 DNAJB9Q9UBS3 223 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 IL20RAQ9UHF4 553 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 AMDHD2Q9Y303 409 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 ADAM18Q9Y3Q7 739 aa13.03□□□□□ -0.32
COL9A1-204ENST00000370496 CENPEQ02224 2701 aa13.02□□□□□ -0.32
COL9A1-204ENST00000370496 CELSR2Q9HCU4 2923 aa13.02□□□□□ -0.32
COL9A1-204ENST00000370496 A0A096LPE4 126 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 A0A1W2PPZ6 126 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 A0A1W2PR80 420 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 A6NIZ1 184 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 CENPBD1B2RD01 187 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 RPL36A-HNRNPH2H7BZ11 118 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 XKRYO14609 159 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 DEAF1O75398 565 aaPredicted RBP13.02□□□□□ -0.33
COL9A1-204ENST00000370496 CTAG2O75638 210 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 TRMUO75648 421 aaKnown RBP13.02□□□□□ -0.33
COL9A1-204ENST00000370496 TIPRLO75663 272 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 ACVR1BP36896 505 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 GSSP48637 474 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 IST1P53990 364 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 UBE2NP61088 152 aaKnown RBP13.02□□□□□ -0.33
COL9A1-204ENST00000370496 RAP1BP61224 184 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 RAP1AP62834 184 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 ERVK-25P63136 954 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 ARF1P84077 181 aaKnown RBP13.02□□□□□ -0.33
COL9A1-204ENST00000370496 TSPAN31Q12999 210 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 MICAQ29983 383 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 TBRG1Q3YBR2 411 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 BEX5Q5H9J7 111 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 ARMC4Q5T2S8 1044 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 ANKRD16Q6P6B7 361 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF620Q6ZNG0 422 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 YTHDF3Q7Z739 585 aaKnown RBP13.02□□□□□ -0.33
COL9A1-204ENST00000370496 LRRC75AQ8NAA5 344 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 PAPD5Q8NDF8 572 aaKnown RBP13.02□□□□□ -0.33
COL9A1-204ENST00000370496 OR52L1Q8NGH7 329 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 TMEM54Q969K7 222 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 MUS81Q96NY9 551 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 OR52D1Q9H346 318 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 SLC17A5Q9NRA2 495 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 RASSF1Q9NS23 344 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 POFUT2Q9Y2G5 429 aa13.02□□□□□ -0.33
COL9A1-204ENST00000370496 MAGED1Q9Y5V3 778 aaPredicted RBP13.02□□□□□ -0.33
COL9A1-204ENST00000370496 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-204ENST00000370496 DEFB108AA8MXU0 73 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 WNT11O96014 354 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 HRGP04196 525 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 B4GALT1P15291 398 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF26P17031 533 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-204ENST00000370496 SLC6A6P31641 620 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 CAPZA2P47755 286 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 RPS6KA3P51812 740 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 NR1H2P55055 460 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 MYBPC1Q00872 1141 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 RUNX1T1Q06455 604 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 GABPB1Q06547 395 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-204ENST00000370496 KRR1Q13601 381 aaKnown RBP13.01□□□□□ -0.33
COL9A1-204ENST00000370496 THSD4Q6ZMP0 1018 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF519Q8TB69 540 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 GIPC3Q8TF64 312 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 HDAC2Q92769 488 aaKnown RBP13.01□□□□□ -0.33
COL9A1-204ENST00000370496 GTPBP3Q969Y2 492 aaKnown RBP13.01□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF837Q96EG3 531 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-204ENST00000370496 PLPPR2Q96GM1 343 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 GPX7Q96SL4 187 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-204ENST00000370496 ALG12Q9BV10 488 aa13.01□□□□□ -0.33
COL9A1-204ENST00000370496 ESRP2Q9H6T0 727 aaKnown RBP13.01□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF346Q9UL40 294 aaKnown RBP13.01□□□□□ -0.33
COL9A1-204ENST00000370496 TEX13CA0A0J9YWL9 993 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 ARRDC5A6NEK1 342 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 SIAH2O43255 324 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 PTP4A3O75365 173 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 PPP1R3DO95685 299 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 QDPRP09417 244 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 FCGR1AP12314 374 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 SDHAP31040 664 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF83P51522 516 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF84P51523 738 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 ARHGDIAP52565 204 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 FXYD6P3P58550 94 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 KPNB1Q14974 876 aaKnown RBP13□□□□□ -0.33
COL9A1-204ENST00000370496 GPR139Q6DWJ6 353 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF770Q6IQ21 691 aaPredicted RBP13□□□□□ -0.33
COL9A1-204ENST00000370496 RPL13AP3Q6NVV1 102 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 KLHL17Q6TDP4 642 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF813Q6ZN06 617 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 DPY19L2P2Q6ZN68 376 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 ARIH2OSQ8N7S6 290 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 MAGEE2Q8TD90 523 aaPredicted RBP13□□□□□ -0.33
COL9A1-204ENST00000370496 RASD2Q96D21 266 aa13□□□□□ -0.33
COL9A1-204ENST00000370496 Q96M85 177 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms