RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 FADS2O95864 444 aaKnown RBP7.86□□□□□ -1.15
SNX27-201ENST00000368838 CH25HO95992 272 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 P04436 131 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 IGFBP1P08833 259 aaPredicted RBP7.86□□□□□ -1.15
SNX27-201ENST00000368838 CCL3P10147 92 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 GAAP10253 952 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 CD33P20138 364 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 PAICSP22234 425 aaKnown RBP7.86□□□□□ -1.15
SNX27-201ENST00000368838 NME2P22392 152 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 SLC2A5P22732 501 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 SDHAP31040 664 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 FMO3P31513 532 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 MTNR1AP48039 350 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 CDH15P55291 814 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 RAC1P63000 192 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 H3F3AP84243 136 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 BDH1Q02338 343 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 ZNF91Q05481 1191 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 LGALS3BPQ08380 585 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 ST3GAL4Q11206 333 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 FOXO1Q12778 655 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 ITGADQ13349 1161 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 POU4F3Q15319 338 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 KRTCAP3Q53RY4 240 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 XKRXQ6PP77 449 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 B3GNT6Q6ZMB0 384 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 LINC00299Q6ZSB3 139 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 MDGA2Q7Z553 956 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 PXKQ7Z7A4 578 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 SULF2Q8IWU5 870 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 FAM98AQ8NCA5 519 aaKnown RBP7.86□□□□□ -1.15
SNX27-201ENST00000368838 OR4K17Q8NGC6 315 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 OR1J4Q8NGS1 313 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 OR13C2Q8NGS9 318 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 POC1BQ8TC44 478 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 FNDC8Q8TC99 324 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 HAVCR2Q8TDQ0 301 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 RORBQ92753 470 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 PTP4A1Q93096 173 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 TAAR8Q969N4 342 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 KTI12Q96EK9 354 aaPredicted RBP7.86□□□□□ -1.15
SNX27-201ENST00000368838 TMEM80Q96HE8 168 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 SH3YL1Q96HL8 342 aaPredicted RBP7.86□□□□□ -1.15
SNX27-201ENST00000368838 PLEKHA8Q96JA3 519 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 MNTQ99583 582 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 IFT27Q9BW83 186 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 ENKD1Q9H0I2 346 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 CHST11Q9NPF2 352 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 TAS2R5Q9NYW4 299 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 RPH3AQ9Y2J0 694 aaPredicted RBP7.86□□□□□ -1.15
SNX27-201ENST00000368838 ZNF835Q9Y2P0 537 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 CEPT1Q9Y6K0 416 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 MED12Q93074 2177 aa7.86□□□□□ -1.15
SNX27-201ENST00000368838 A0A0G2JMM0 328 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 A0A1W2PPB8 328 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 A0A1W2PRS3 328 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 PINLYPA6NC86 204 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 LIPT2A6NK58 231 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 GJE1A6NN92 205 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 FAM90A27PA6NNH2 459 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 KIR3DP1A8MWS1 328 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 ZNF99A8MXY4 864 aaPredicted RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 PTGES3LE9PB15 166 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 PRR23D1E9PI22 279 aaPredicted RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 G3V3Y1 287 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 PLPP3O14495 311 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 EFNA2O43921 213 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 ZIC3O60481 467 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 EIF1BO60739 113 aaKnown RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 TRMUO75648 421 aaKnown RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 HIST1H2ABP04908 130 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 HPNP05981 417 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 TPOP07202 933 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 PRR23D2P0DMB1 279 aaPredicted RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 ATP6V1B1P15313 513 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 CD53P19397 219 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 PTGER4P35408 488 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 MASP1P48740 699 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 AGFG1P52594 562 aaKnown RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 CDH11P55287 796 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 GPR50Q13585 617 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 BCL2A1Q16548 175 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 SMN1Q16637 294 aaKnown RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 ALG10Q5BKT4 473 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 NIPAL3Q6P499 406 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 MEX3BQ6ZN04 569 aaKnown RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 GDPGP1Q6ZNW5 385 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 H1FNTQ75WM6 255 aaPredicted RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 MEPCEQ7L2J0 689 aaKnown RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 HIST3H2AQ7L7L0 130 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 CXXC5Q7LFL8 322 aaKnown RBP7.85□□□□□ -1.15
SNX27-201ENST00000368838 ZNF367Q7RTV3 350 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 HDDC2Q7Z4H3 204 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 NANOGNBQ7Z5D8 188 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 GPR141Q7Z602 305 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 CD163Q86VB7 1156 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 ANKRD13BQ86YJ7 626 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 GHDCQ8N2G8 530 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 RPRMLQ8N4K4 120 aa7.85□□□□□ -1.15
SNX27-201ENST00000368838 IQCF1Q8N6M8 205 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms