RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 C4orf47A7E2U8 309 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 G3V3Q6 166 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 NDUFB5O43674 189 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 CREBL2O60519 120 aaPredicted RBP12.96□□□□□ -0.34
CD48-201ENST00000368045 EIF4E2O60573 245 aaKnown RBP12.96□□□□□ -0.34
CD48-201ENST00000368045 AKR7A3O95154 331 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 CSRP1P21291 193 aaKnown RBP12.96□□□□□ -0.34
CD48-201ENST00000368045 MAGEB1P43366 347 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 SOX2P48431 317 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 DLX2Q07687 328 aaPredicted RBP12.96□□□□□ -0.34
CD48-201ENST00000368045 CBFBQ13951 182 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 ZNF626Q68DY1 528 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 SLC25A25Q6KCM7 469 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 Q6ZTK2 550 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 GKN2Q86XP6 184 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 TMEM151BQ8IW70 566 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 GLB1L2Q8IW92 636 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 THEM6Q8WUY1 208 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 TAAR8Q969N4 342 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 MCHR2Q969V1 340 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 MSANTD3Q96H12 275 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 C4orf45Q96LM5 186 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 DCBLD2Q96PD2 775 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 DPCDQ9BVM2 203 aaPredicted RBP12.96□□□□□ -0.34
CD48-201ENST00000368045 GPR174Q9BXC1 333 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 TMPRSS13Q9BYE2 586 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 BEX1Q9HBH7 125 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 SLC17A5Q9NRA2 495 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 WSB2Q9NYS7 404 aaPredicted RBP12.96□□□□□ -0.34
CD48-201ENST00000368045 GLTPQ9NZD2 209 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 TRANK1O15050 2925 aa12.96□□□□□ -0.34
CD48-201ENST00000368045 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.95□□□□□ -0.34
CD48-201ENST00000368045 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.95□□□□□ -0.34
CD48-201ENST00000368045 TVP23AA6NH52 213 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 H7C417 338 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 DCTN6O00399 190 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 CDC40O60508 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
CD48-201ENST00000368045 MT-ATP6P00846 226 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 BGLAPP02818 100 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 CSF1P09603 554 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 M6PRP20645 277 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 RAD52P43351 418 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 RAB14P61106 215 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 PUDPQ08623 228 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 TOMM20Q15388 145 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 SIGIRRQ6IA17 410 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 ANKRD16Q6P6B7 361 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 SIX5Q8N196 739 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 FTMTQ8N4E7 242 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 MEIOBQ8N635 442 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 FRMD1Q8N878 549 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 OTOSQ8NHW6 89 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 GCDHQ92947 438 aaPredicted RBP12.95□□□□□ -0.34
CD48-201ENST00000368045 SLC38A3Q99624 504 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 SOHLH2Q9NX45 425 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 MGAT4CQ9UBM8 478 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 MTFP1Q9UDX5 166 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 ZNF346Q9UL40 294 aaKnown RBP12.95□□□□□ -0.34
CD48-201ENST00000368045 TMEM184BQ9Y519 407 aaPredicted RBP12.95□□□□□ -0.34
CD48-201ENST00000368045 MAB21L2Q9Y586 359 aa12.95□□□□□ -0.34
CD48-201ENST00000368045 IGKV3D-11A0A0A0MRZ8 115 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 RPS10-NUDT3A0A1W2PQS6 291 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 M0R233 179 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 XKRYO14609 159 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 RBBP9O75884 186 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 OR2A4O95047 310 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 MPC2O95563 127 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 IGKV3-11P04433 115 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 CXCR1P25024 350 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 ITPKBP27987 946 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 TSPAN5P62079 268 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 SSBP1Q04837 148 aaKnown RBP12.94□□□□□ -0.34
CD48-201ENST00000368045 DMWDQ09019 674 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 EXOSC2Q13868 293 aaKnown RBP12.94□□□□□ -0.34
CD48-201ENST00000368045 GRK1Q15835 563 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 LINC00303Q3SY05 128 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 FAM209AQ5JX71 171 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 MAMDC2Q7Z304 686 aaPredicted RBP12.94□□□□□ -0.34
CD48-201ENST00000368045 METTL27Q8N6F8 245 aaPredicted RBP12.94□□□□□ -0.34
CD48-201ENST00000368045 DNAAF1Q8NEP3 725 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 SUN5Q8TC36 379 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 TMEM106AQ96A25 262 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 ADIPOR1Q96A54 375 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 MVB12AQ96EY5 273 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 OR2A7Q96R45 310 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 RAB33BQ9H082 229 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 PNO1Q9NRX1 252 aaKnown RBP12.94□□□□□ -0.34
CD48-201ENST00000368045 TRAV8-7A0A075B6U6 113 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 TO15178 435 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 PGCP20142 388 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 DCTDP32321 178 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 ZNF117Q03924 483 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 RBMS2Q15434 407 aaKnown RBP12.94□□□□□ -0.34
CD48-201ENST00000368045 ELAVL1Q15717 326 aaKnown RBP12.94□□□□□ -0.34
CD48-201ENST00000368045 TOR2AQ5JU69 321 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 STPG1Q5TH74 334 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 DPY19L4Q7Z388 723 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 OR8B4Q96RC9 309 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 SEC22CQ9BRL7 303 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 SLC2A4RGQ9NR83 387 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms