RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 HS3ST1O14792 307 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 SMAD7O15105 426 aaKnown RBP12.8□□□□□ -0.36
SF3B5-201ENST00000367569 CELA3BP08861 270 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 ERFP50548 548 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 MNAT1P51948 309 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 TGFBR3Q03167 851 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 FMODQ06828 376 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 CLDN22Q8N7P3 220 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 SYT14Q8NB59 555 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 NOXO1Q8NFA2 376 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 SLC7A13Q8TCU3 470 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 IGFBPL1Q8WX77 278 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 ASB10Q8WXI3 467 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 ACOT11Q8WXI4 607 aaPredicted RBP12.8□□□□□ -0.36
SF3B5-201ENST00000367569 BCL2L2Q92843 193 aaPredicted RBP12.8□□□□□ -0.36
SF3B5-201ENST00000367569 PYURFQ96I23 114 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 HS6ST2Q96MM7 605 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 ZNF347Q96SE7 839 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 GORASP2Q9H8Y8 452 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 INIPQ9NRY2 104 aa12.8□□□□□ -0.36
SF3B5-201ENST00000367569 HIVEP2P31629 2446 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 ANK3Q12955 4377 aaKnown RBP12.79□□□□□ -0.36
SF3B5-201ENST00000367569 LOC102725191A0A1B0GVB3 256 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 A0A1W2PRG6 482 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 SHISA9B4DS77 424 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 ATP6V1G2-DDX39BF2Z307 99 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 H7C1C5 153 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 FABP3P05413 133 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 CD40P25942 277 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 UBE2NP61088 152 aaKnown RBP12.79□□□□□ -0.36
SF3B5-201ENST00000367569 LCN6P62502 163 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 MS4A2Q01362 244 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 ZP4Q12836 540 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 NPRL3Q12980 569 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 ALG10Q5BKT4 473 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 SLC22A25Q6T423 547 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 MBOAT2Q6ZWT7 520 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 P2RY8Q86VZ1 359 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 C17orf78Q8N4C9 275 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 GTPBP3Q969Y2 492 aaKnown RBP12.79□□□□□ -0.36
SF3B5-201ENST00000367569 RADILQ96JH8 1075 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 THTPAQ9BU02 230 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 BDH2Q9BUT1 245 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 GSX2Q9BZM3 304 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 B3GAT2Q9NPZ5 323 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 TAS2R1Q9NYW7 299 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 IL20RAQ9UHF4 553 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 POU2F3Q9UKI9 436 aa12.79□□□□□ -0.36
SF3B5-201ENST00000367569 FAM32AQ9Y421 112 aaKnown RBP12.79□□□□□ -0.36
SF3B5-201ENST00000367569 IGHV1-18A0A0C4DH31 117 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 TCRBV5S2A0A599 114 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 OR6C65A6NJZ3 312 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 FAM171A2A8MVW0 826 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 SLC2A10O95528 541 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 BCL10O95999 233 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 HLA-HP01893 362 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 PATE4P0C8F1 98 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 PGA4P0DJD7 388 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 PGA3P0DJD8 388 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 RHCEP18577 417 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 RRM2P31350 389 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 CDKN1AP38936 164 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 SLC9A3P48764 834 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 PTH2RP49190 550 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 IDH3GP51553 393 aaPredicted RBP12.78□□□□□ -0.36
SF3B5-201ENST00000367569 CLRN1P58418 232 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 PRPS1P60891 318 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 PRKCDQ05655 676 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 PPP1R8Q12972 351 aaKnown RBP12.78□□□□□ -0.36
SF3B5-201ENST00000367569 ZNF672Q499Z4 452 aaPredicted RBP12.78□□□□□ -0.36
SF3B5-201ENST00000367569 IQCCQ4KMZ1 466 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 ANKRD16Q6P6B7 361 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 KLHL17Q6TDP4 642 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 TMEM108Q6UXF1 575 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 ZNF813Q6ZN06 617 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 MDP1Q86V88 176 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 ZDHHC21Q8IVQ6 265 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 OR4K5Q8NGD3 323 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 TMEM54Q969K7 222 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 FBXW5Q969U6 566 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 ZNF566Q969W8 418 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 TSPAN32Q96QS1 320 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 TNFRSF13CQ96RJ3 184 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 MOKQ9UQ07 419 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 LAMP3Q9UQV4 416 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 POFUT2Q9Y2G5 429 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 ADAM18Q9Y3Q7 739 aa12.78□□□□□ -0.36
SF3B5-201ENST00000367569 PLCE1Q9P212 2302 aa12.77□□□□□ -0.36
SF3B5-201ENST00000367569 ZNF99A8MXY4 864 aaPredicted RBP12.77□□□□□ -0.37
SF3B5-201ENST00000367569 TRMUO75648 421 aaKnown RBP12.77□□□□□ -0.37
SF3B5-201ENST00000367569 GADD45GO95257 159 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 WNT11O96014 354 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 SOD3P08294 240 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 CD79AP11912 226 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 ZNF26P17031 533 aaPredicted RBP12.77□□□□□ -0.37
SF3B5-201ENST00000367569 SH3BGRP55822 239 aaPredicted RBP12.77□□□□□ -0.37
SF3B5-201ENST00000367569 CTXN1P60606 82 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 RPS4XP62701 263 aaKnown RBP12.77□□□□□ -0.37
SF3B5-201ENST00000367569 PIGFQ07326 219 aa12.77□□□□□ -0.37
SF3B5-201ENST00000367569 CD47Q08722 323 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms