RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 LHX6Q9UPM6 363 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 PRAMEF27A3QJZ7 478 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 TOR1AO14656 332 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 CSF1P09603 554 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 FOLR1P15328 257 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 DNASE1P24855 282 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 MNX1P50219 401 aaPredicted RBP10.61□□□□□ -0.71
SYNE1-204ENST00000367248 MEP1BQ16820 701 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 NDUFAF7Q7L592 441 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 ACOD1A6NK06 481 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 CLDN24A6NM45 220 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 DRD5P21918 477 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 SELENBP1Q13228 472 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 LSAMPQ13449 338 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 OR5T1Q8NG75 326 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 OR2A14Q96R47 310 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 OR11A1Q9GZK7 315 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 SHOXO15266 292 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 TFPTP0C1Z6 253 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 RPL27P61353 136 aaKnown RBP10.61□□□□□ -0.71
SYNE1-204ENST00000367248 SLC15A4Q8N697 577 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 GLYATL2Q8WU03 294 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 ST8SIA1Q92185 356 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 TMEM106AQ96A25 262 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 PRDM7Q9NQW5 492 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 ACER3Q9NUN7 267 aa10.61□□□□□ -0.71
SYNE1-204ENST00000367248 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.6□□□□□ -0.71
SYNE1-204ENST00000367248 A0A1W2PR80 420 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 SNAPC5O75971 98 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 MTCP1P56278 107 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 EXOSC6Q5RKV6 272 aaKnown RBP10.6□□□□□ -0.71
SYNE1-204ENST00000367248 COX15Q7KZN9 410 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 TMPRSS7Q7RTY8 843 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 IKZF5Q9H5V7 419 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 APMAPQ9HDC9 416 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 HRH3Q9Y5N1 445 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 NAP1L6A6NFF2 107 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 GSTP1P09211 210 aaKnown RBP10.6□□□□□ -0.71
SYNE1-204ENST00000367248 CALCBP10092 127 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 HTR1FP30939 366 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF81P51508 661 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 FXNQ16595 210 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF766Q5HY98 468 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF684Q5T5D7 378 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 ANKRD13BQ86YJ7 626 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 CMTM1Q8IZ96 169 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 RASD2Q96D21 266 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 SARGQ9BW04 601 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 ABCA3Q99758 1704 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 TMEM212A6NML5 194 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 M0R233 179 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 LGALS8O00214 317 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 RAB12Q6IQ22 244 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 ENTHD1Q8IYW4 607 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 STEAP2Q8NFT2 490 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 C11orf40Q8WZ69 217 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 GHSRQ92847 366 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 AIFM2Q9BRQ8 373 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 METTL9Q9H1A3 318 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF736B4DX44 427 aaPredicted RBP10.6□□□□□ -0.71
SYNE1-204ENST00000367248 K7EQS6 105 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 GABRPO00591 440 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 BET1O15155 118 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 YBX1P67809 324 aaKnown RBP10.6□□□□□ -0.71
SYNE1-204ENST00000367248 RPL19P84098 196 aaKnown RBP10.6□□□□□ -0.71
SYNE1-204ENST00000367248 OTPQ5XKR4 325 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 SDSLQ96GA7 329 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 WWTR1Q9GZV5 400 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 MGAT4CQ9UBM8 478 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 TTC3P53804 2025 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 CDHR4A6H8M9 788 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 F5H0A9 414 aaPredicted RBP10.6□□□□□ -0.71
SYNE1-204ENST00000367248 ICOSLGO75144 302 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 PRTGQ2VWP7 1150 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 PM20D2Q8IYS1 436 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 SYNPRQ8TBG9 265 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 TTC9Q92623 222 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 PHB2Q99623 299 aa10.6□□□□□ -0.71
SYNE1-204ENST00000367248 TEX51A0A1B0GUA7 166 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 LIPCP11150 499 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 KIR2DL1P43626 348 aaPredicted RBP10.59□□□□□ -0.71
SYNE1-204ENST00000367248 KDM4DQ6B0I6 523 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 ZDHHC16Q969W1 377 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 C7orf34Q96L11 122 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 BCORQ6W2J9 1755 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 LOXHD1Q8IVV2 1947 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 A0A0A6YYD5 115 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 LRRC30A6NM36 301 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 PAPLNO95428 1278 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 RPA2P15927 270 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 RPL11P62913 178 aaKnown RBP10.59□□□□□ -0.71
SYNE1-204ENST00000367248 PHC1P78364 1004 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 BORAQ6PGQ7 559 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF547Q8IVP9 402 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 CCDC71LQ8N9Z2 235 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 TMEM185AQ8NFB2 350 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 TBCCD1Q9NVR7 557 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 KCNN3Q9UGI6 736 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 FBXL4Q9UKA2 621 aa10.59□□□□□ -0.71
SYNE1-204ENST00000367248 SPTA1P02549 2419 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms