RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 HDDC2Q7Z4H3 204 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 DPPA2Q7Z7J5 298 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 PTOV1Q86YD1 416 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 OR6X1Q8NH79 312 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 ADAMTS16Q8TE57 1224 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 UBASH3BQ8TF42 649 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 HIST1H2ACQ93077 130 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 ZNF566Q969W8 418 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 MRPL24Q96A35 216 aaKnown RBP12.81□□□□□ -0.36
CTSD-202ENST00000367196 TXNDC15Q96J42 360 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 SLC7A8Q9UHI5 535 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 ZNF229Q9UJW7 825 aa12.81□□□□□ -0.36
CTSD-202ENST00000367196 SLC22A23A1A5C7 686 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 LRRN3E7EW58 273 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 OPN1SWP03999 348 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 ADRA2AP08913 450 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 TACSTD2P09758 323 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 OR8G3PP0DMU2 310 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 CD247P20963 164 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 PCMT1P22061 227 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 APEX1P27695 318 aaKnown RBP12.8□□□□□ -0.36
CTSD-202ENST00000367196 PCGF2P35227 344 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 GIPRP48546 466 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 BIDP55957 195 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 PIGFQ07326 219 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 ZP4Q12836 540 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 ZNF74Q16587 644 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 DUSP7Q16829 419 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 CDK20Q8IZL9 346 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 OR6T1Q8NGN1 323 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 SLC25A44Q96H78 314 aaPredicted RBP12.8□□□□□ -0.36
CTSD-202ENST00000367196 SH3GL1Q99961 368 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 C1orf198Q9H425 327 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 KAT8Q9H7Z6 458 aaKnown RBP12.8□□□□□ -0.36
CTSD-202ENST00000367196 GLTPQ9NZD2 209 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 GPR160Q9UJ42 338 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 ZNF346Q9UL40 294 aaKnown RBP12.8□□□□□ -0.36
CTSD-202ENST00000367196 SLC7A7Q9UM01 511 aa12.8□□□□□ -0.36
CTSD-202ENST00000367196 TMEM129A0AVI4 362 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 CH25HO95992 272 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 PTHP01270 115 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 UMPSP11172 480 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 ZNF35P13682 527 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 SELENOVP59797 346 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 NRN1LQ496H8 165 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 METTL21CQ5VZV1 264 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 NHLRC1Q6VVB1 395 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 NANOGNBQ7Z5D8 188 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 ARIH2OSQ8N7S6 290 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 LINC01356Q8N9X3 169 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 VANGL1Q8TAA9 524 aaPredicted RBP12.79□□□□□ -0.36
CTSD-202ENST00000367196 TMEM54Q969K7 222 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 MS4A3Q96HJ5 214 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 WFDC6Q9BQY6 131 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 POLR2J2Q9GZM3 115 aaKnown RBP12.79□□□□□ -0.36
CTSD-202ENST00000367196 PCDHAC1Q9H158 963 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 POLR2J3Q9H1A7 115 aaKnown RBP12.79□□□□□ -0.36
CTSD-202ENST00000367196 NPHS2Q9NP85 383 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 ARGLU1Q9NWB6 273 aaPredicted RBP12.79□□□□□ -0.36
CTSD-202ENST00000367196 STX18Q9P2W9 335 aaKnown RBP12.79□□□□□ -0.36
CTSD-202ENST00000367196 REV1Q9UBZ9 1251 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 SVEP1Q4LDE5 3571 aa12.79□□□□□ -0.36
CTSD-202ENST00000367196 A0A0G2JND7 137 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 KPNA4O00629 521 aaPredicted RBP12.78□□□□□ -0.36
CTSD-202ENST00000367196 MGRN1O60291 552 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 BCL10O95999 233 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 IFNA14P01570 189 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 IGHG1P01857 330 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 RIN1Q13671 783 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 CYLC2Q14093 348 aaPredicted RBP12.78□□□□□ -0.36
CTSD-202ENST00000367196 NPTX1Q15818 432 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 VMACQ2NL98 169 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 TMEM53Q6P2H8 277 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 HDXQ7Z353 690 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 RETREG3Q86VR2 466 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 ZCCHC24Q8N2G6 241 aaKnown RBP12.78□□□□□ -0.36
CTSD-202ENST00000367196 SLC22A24Q8N4F4 322 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 GPR32P1Q8NGA4 272 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 OR10A6Q8NH74 314 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 ZNF75AQ96N20 296 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 MRPL37Q9BZE1 423 aaKnown RBP12.78□□□□□ -0.36
CTSD-202ENST00000367196 TPK1Q9H3S4 243 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 ZNF385DQ9H6B1 395 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 VIPAS39Q9H9C1 493 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 BAG5Q9UL15 447 aa12.78□□□□□ -0.36
CTSD-202ENST00000367196 A0A1W2PPW3 197 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 A0A1W2PRG6 482 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 LRP5LA4QPB2 252 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 CENPBD1B2RD01 187 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 MCIDASD6RGH6 385 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 DHHO43323 396 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 EDF1O60869 148 aaKnown RBP12.77□□□□□ -0.37
CTSD-202ENST00000367196 SERPINA5P05154 406 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 ASAH2BP0C7U1 165 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 NR2C1P13056 603 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 RBM34P42696 430 aaKnown RBP12.77□□□□□ -0.37
CTSD-202ENST00000367196 DAP3P51398 398 aaKnown RBP12.77□□□□□ -0.37
CTSD-202ENST00000367196 ZNF84P51523 738 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 CLRN1P58418 232 aa12.77□□□□□ -0.37
CTSD-202ENST00000367196 SELPLGQ14242 412 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms