RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 KDM8Q8N371 416 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PNPLA2Q96AD5 504 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NRIP3Q9NQ35 241 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PRDM7Q9NQW5 492 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SERTAD4Q9NUC0 356 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMEM100Q9NV29 134 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 IL20Q9NYY1 176 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 FAM96BQ9Y3D0 163 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 IER3IP1Q9Y5U9 82 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 B3GALT1Q9Y5Z6 326 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PIGBOS1A0A0B4J2F0 54 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 BTBD17A6NE02 478 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TRIM77I1YAP6 450 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 GAAP10253 952 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC6A9P48067 706 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF84P51523 738 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 PLA2G7Q13093 441 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 PRSS36Q5K4E3 855 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ARHGAP40Q5TG30 622 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 MISPQ8IVT2 679 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 URM1Q9BTM9 101 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 C20orf24Q9BUV8 137 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SEMA6CQ9H3T2 930 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 FAM212BQ9NTI7 297 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC23A2Q9UGH3 650 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 RALGAPA1Q6GYQ0 2036 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 DSCR3O14972 297 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 LATO43561 262 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 FBXO24O75426 580 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 RAD51DO75771 328 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 EPHA2P29317 976 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 NAA10P41227 235 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 CAV2P51636 162 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 RANP62826 216 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SIRPAP78324 504 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ACY1Q03154 408 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TLE1Q04724 770 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ARL6IP1Q15041 203 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 MCEMP1Q8IX19 187 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TCTE3Q8IZS6 198 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SDR9C7Q8NEX9 313 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 NPRL2Q8WTW4 380 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 FYTTD1Q96QD9 318 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 INIPQ9NRY2 104 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 MMACHCQ9Y4U1 282 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 POMT1Q9Y6A1 747 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 PRRC2BQ5JSZ5 2229 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 PLRG1O43660 514 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 GNB3P16520 340 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TYRP1P17643 537 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SPI1P17947 270 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 CNR1P21554 472 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 IL13RA1P78552 427 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 MEF2DQ14814 521 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TP53I3Q53FA7 332 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMEM215Q68D42 235 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMEM255BQ8WV15 326 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 PRRT1Q99946 306 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 KATNB1Q9BVA0 655 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 CRISPLD2Q9H0B8 497 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 C20orf85Q9H1P6 137 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 NDRG2Q9UN36 371 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 H0YGG7 62 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SGK494L7N484 410 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 CHRM4P08173 479 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 IFNGR1P15260 489 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 FBLP22087 321 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 RAB13P51153 203 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 CLDN20P56880 219 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 EXOSC2Q13868 293 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 AGERQ15109 404 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF836Q6ZNA1 936 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF704Q6ZNC4 412 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMPRSS7Q7RTY8 843 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 CCDC71LQ8N9Z2 235 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 PEX11GQ96HA9 241 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 RNF170Q96K19 258 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 KCNS2Q9ULS6 477 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 GAB2Q9UQC2 676 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC22A7Q9Y694 548 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 RNF215Q9Y6U7 377 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 MT-CO2P00403 227 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 HNRNPKP61978 463 aaKnown RBP eCLIP4.94□□□□□ -1.622e-6■■■■■ 27.5
CDC42BPA-204ENST00000366767 SELENBP1Q13228 472 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 MRM1Q6IN84 353 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 Q6ZSR6 202 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMPRSS11FQ6ZWK6 438 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 CD163Q86VB7 1156 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMEM151BQ8IW70 566 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SGPP2Q8IWX5 399 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 RDH10Q8IZV5 341 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF808Q8N4W9 903 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR5L2Q8NGL0 311 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMEM43Q9BTV4 400 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SRA1Q9HD15 236 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 GAR1Q9NY12 217 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 RCE1Q9Y256 329 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 MYOFQ9NZM1 2061 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 MEIS3P1A6NDR6 274 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 POM121BA6NF01 834 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms