RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 OR10S1Q8NGN2 331 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 MIPOL1Q8TD10 442 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 ST7LQ8TDW4 575 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 XAGE5Q8WWM1 108 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 ROPN1LQ96C74 230 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 TIMD4Q96H15 378 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 DCLRE1CQ96SD1 692 aaKnown RBP7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 SAP30LQ9HAJ7 183 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 RLIMQ9NVW2 624 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 FAM53CQ9NYF3 392 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 RASD1Q9Y272 281 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 FIS1Q9Y3D6 152 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 DNAJC15Q9Y5T4 150 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 NUP214P35658 2090 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 RNF103-CHMP3A0A140T963 221 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 C5orf63A6NC05 138 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 CFAP73A6NFT4 308 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 AGAP5A6NIR3 686 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 TPD52L2O43399 206 aaKnown RBP7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SPRY3O43610 288 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 VAMP5O95183 116 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 OPN1MWP04001 364 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 GUSBP08236 651 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 TFPTP0C1Z6 253 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 OPN1MW2P0DN77 364 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 OPN1MW3P0DN78 364 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 MPV17P39210 176 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SERPINB9P50453 376 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 MMP15P51511 669 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 GALK2Q01415 458 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 TEKQ02763 1124 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZMYND11Q15326 602 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 MAPK11Q15759 364 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SYPL1Q16563 259 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 UGT3A2Q3SY77 523 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZCCHC23Q6ZST2 131 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 R3HCC1LQ7Z5L2 792 aaKnown RBP7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SLC22A9Q8IVM8 553 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 C20orf196Q8IYI0 205 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SPATA4Q8NEY3 305 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SYNPRQ8TBG9 265 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 GEMIN6Q8WXD5 167 aaKnown RBP7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SLC25A36Q96CQ1 311 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 TXNDC15Q96J42 360 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SLC35G5Q96KT7 338 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 C1orf50Q9BV19 199 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 MRI1Q9BV20 369 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 EMC6Q9BV81 110 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SLC38A1Q9H2H9 487 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 PATZ1Q9HBE1 687 aaKnown RBP7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 DECR2Q9NUI1 292 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SLC7A8Q9UHI5 535 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZNF180Q9UJW8 692 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 PYCARDQ9ULZ3 195 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 CHST2Q9Y4C5 530 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 SAR1BQ9Y6B6 198 aa7.1□□□□□ -1.27
HMGB1P39-201ENST00000366304 PLXNB1O43157 2135 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 DUXAA6NLW8 204 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 A8MVM7 634 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 CFLARO15519 480 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 GPR137BO60478 399 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 FZD7O75084 574 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 CRCPO75575 148 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 IGHV3-13P01766 116 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 SERPINA5P05154 406 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 CRYBA1P05813 215 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 GSTA1P08263 222 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 SNRPAP09012 282 aaKnown RBP7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 CSF1P09603 554 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZNF43P17038 809 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 RPS4Y1P22090 263 aaKnown RBP7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 CXCR1P25024 350 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 RPS5P46782 204 aaKnown RBP7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZNF81P51508 661 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 MAP2K6P52564 334 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 SLC7A5Q01650 507 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 CAV1Q03135 178 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 C2orf68Q2NKX9 166 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 LSM12Q3MHD2 195 aaKnown RBP7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 MRPL2Q5T653 305 aaKnown RBP7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 KANK2Q63ZY3 851 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZNF774Q6NX45 483 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZYG11AQ6WRX3 759 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 WDR88Q6ZMY6 472 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 TIFABQ6ZNK6 161 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 Q6ZSV7 163 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 RNF130Q86XS8 419 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 DDIASQ8IXT1 998 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 CADM2Q8N3J6 435 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 SLC30A7Q8NEW0 376 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZNF519Q8TB69 540 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 MOAP1Q96BY2 351 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 ELMOD3Q96FG2 381 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 C3orf30Q96M34 536 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 OXGR1Q96P68 337 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 SIGLEC11Q96RL6 698 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 TAPBPLQ9BX59 468 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 LIN7BQ9HAP6 207 aa7.09□□□□□ -1.27
HMGB1P39-201ENST00000366304 TCF7L2Q9NQB0 619 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms