RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 YY1AP1Q9H869 796 aa1.92□□□□□ -2.1
RNU6-553P-201ENST00000364047 C12orf10Q9HB07 376 aa1.92□□□□□ -2.1
RNU6-553P-201ENST00000364047 MCCC2Q9HCC0 563 aa1.92□□□□□ -2.1
RNU6-553P-201ENST00000364047 HMG20AQ9NP66 347 aa1.92□□□□□ -2.1
RNU6-553P-201ENST00000364047 ADAP2Q9NPF8 381 aa1.92□□□□□ -2.1
RNU6-553P-201ENST00000364047 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.92□□□□□ -2.1
RNU6-553P-201ENST00000364047 MSH6P52701 1360 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 RPAP1Q9BWH6 1393 aaPredicted RBP1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 MBLAC1A4D2B0 266 aaPredicted RBP1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 IFNB1P01574 187 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 IGKV1D-16P01601 117 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 KRT13P13646 458 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 FOLR1P15328 257 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 CCR1P32246 355 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 GINS1Q14691 196 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 PDK4Q16654 411 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 HSP90AA5PQ58FG0 334 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 ZNF493Q6ZR52 646 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 BHLHA15Q7RTS1 189 aaPredicted RBP1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 NUDCD3Q8IVD9 361 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 LGI3Q8N145 548 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 SENP8Q96LD8 212 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 RNF157Q96PX1 679 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 CCT7Q99832 543 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 OSBPL10Q9BXB5 764 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 WDR62O43379 1518 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 YEATS2Q9ULM3 1422 aa1.91□□□□□ -2.1
RNU6-553P-201ENST00000364047 PCM1Q15154 2024 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 IGHV3-74A0A0B4J1X5 117 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 A0A1B0GWJ7 208 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 TMEM223A0PJW6 202 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 METTL21EPA6NDL7 271 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 XPO1O14980 1071 aaKnown RBP1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 RAD51BO15315 384 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 MGRN1O60291 552 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 GABARAPO95166 117 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 UGT2B4P06133 528 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 CAPN1P07384 714 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 CX3CR1P49238 355 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 PRPSAP1Q14558 356 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 RAET1LQ5VY80 246 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 NTM-AS1Q6ZSK4 140 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 TM4SF18Q96CE8 201 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 L3HYPDHQ96EM0 354 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 MED8Q96G25 268 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 GPATCH2LQ9NWQ4 482 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 KIF16BQ96L93 1317 aa1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 CENPJQ9HC77 1338 aaPredicted RBP1.9□□□□□ -2.11
RNU6-553P-201ENST00000364047 DHX57Q6P158 1386 aaKnown RBP1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 IGKV3D-11A0A0A0MRZ8 115 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 SGK1O00141 431 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 TBX19O60806 448 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 CCNKO75909 580 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 RPA2P15927 270 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 AK4P27144 223 aaPredicted RBP1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 OPRD1P41143 372 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 PITPNAQ00169 270 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 LOXL1Q08397 574 aaPredicted RBP1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 PON3Q15166 354 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 FILIP1LQ4L180 1135 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 SFT2D3Q587I9 215 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 DUX4L9Q6RFH8 374 aaPredicted RBP1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 MFSD9Q8NBP5 474 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 RNF139Q8WU17 664 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 NEURL3Q96EH8 262 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 SLC38A2Q96QD8 506 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 FRMPD3Q5JV73 1810 aa1.89□□□□□ -2.11
RNU6-553P-201ENST00000364047 DOCK9Q9BZ29 2069 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 PIKFYVEQ9Y2I7 2098 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 ARPC3O15145 178 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 ZNF207O43670 478 aaKnown RBP1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 SCGNO76038 276 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 FABP3P05413 133 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 BCHEP06276 602 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 DUSP3P51452 185 aaPredicted RBP1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 CDK16Q00536 496 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 MEF2BQ02080 365 aaPredicted RBP1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 ZNF816Q0VGE8 651 aaPredicted RBP1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 POU2AF1Q16633 256 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 FAM78AQ5JUQ0 283 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 TRIM40Q6P9F5 258 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 TMEM179Q6ZVK1 233 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 ABHD13Q7L211 337 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 ZNF557Q8N988 423 aaPredicted RBP1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 MAGEE2Q8TD90 523 aaPredicted RBP1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 TTC25Q96NG3 672 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 MS4A4EQ96PG1 132 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 ZNF382Q96SR6 550 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 DOK1Q99704 481 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 MRPL37Q9BZE1 423 aaKnown RBP1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 PALMDQ9NP74 551 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 ISYNA1Q9NPH2 558 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 SMOXQ9NWM0 555 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 CGNQ9P2M7 1197 aaKnown RBP1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 KIAA1257Q9ULG3 409 aa1.88□□□□□ -2.11
RNU6-553P-201ENST00000364047 CABIN1Q9Y6J0 2220 aa1.87□□□□□ -2.11
RNU6-553P-201ENST00000364047 TRIOBPQ9H2D6 2365 aa1.87□□□□□ -2.11
RNU6-553P-201ENST00000364047 PNPLA6Q8IY17 1366 aa1.87□□□□□ -2.11
RNU6-553P-201ENST00000364047 GPATCH8Q9UKJ3 1502 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms