RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SLC25A30Q5SVS4 291 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 PLBD1Q6P4A8 553 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 P4HA3Q7Z4N8 544 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 CPOQ8IVL8 374 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 CYB561A3Q8NBI2 242 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 NPEPL1Q8NDH3 523 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 ABHD3Q8WU67 409 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 LRR1Q96L50 414 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 ADAD1Q96M93 576 aaKnown RBP18.35■□□□□ 0.53
SHISA4-201ENST00000362011 NR1H4Q96RI1 486 aaPredicted RBP18.35■□□□□ 0.53
SHISA4-201ENST00000362011 NMNAT3Q96T66 252 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 H2AFY2Q9P0M6 372 aaPredicted RBP18.35■□□□□ 0.53
SHISA4-201ENST00000362011 CLCF1Q9UBD9 225 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 FLVCR1Q9Y5Y0 555 aa18.35■□□□□ 0.53
SHISA4-201ENST00000362011 SH3D21A4FU49 640 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 AQP8O94778 261 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 TPOP07202 933 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 ABOP16442 354 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 CHN2P52757 468 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 NXNL2Q5VZ03 156 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 GTF2IRD2BQ6EKJ0 949 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 LAIR2Q6ISS4 152 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 PLXDC2Q6UX71 529 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 GFRALQ6UXV0 394 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 ADGRE4PQ86SQ3 457 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 GTF2IRD2Q86UP8 949 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 GID4Q8IVV7 300 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 MCEMP1Q8IX19 187 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 OR6X1Q8NH79 312 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 FAM57AQ8TBR7 257 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 ZNF582Q96NG8 517 aaPredicted RBP18.34■□□□□ 0.53
SHISA4-201ENST00000362011 TRIB1Q96RU8 372 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 EMC6Q9BV81 110 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 MED20Q9H944 212 aa18.34■□□□□ 0.53
SHISA4-201ENST00000362011 IGKV3D-15A0A087WSY6 115 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 SLC35F4A4IF30 521 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 ZNF726A6NNF4 738 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 H7C1C5 153 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 SLC1A7O00341 560 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 GPR171O14626 319 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 FAM20BO75063 409 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 ENTPD6O75354 484 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 TRMUO75648 421 aaKnown RBP18.33■□□□□ 0.53
SHISA4-201ENST00000362011 GABRA1P14867 456 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 CXCR4P61073 352 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 LCN6P62502 163 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 CSNK2BP67870 215 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 SMN1Q16637 294 aaKnown RBP18.33■□□□□ 0.53
SHISA4-201ENST00000362011 AADACL4Q5VUY2 407 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 ZNF585AQ6P3V2 769 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 BCDIN3DQ7Z5W3 292 aaKnown RBP18.33■□□□□ 0.53
SHISA4-201ENST00000362011 ZNF566Q969W8 418 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 ZNF385AQ96PM9 386 aaKnown RBP18.33■□□□□ 0.53
SHISA4-201ENST00000362011 DDOQ99489 341 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 YTHDF1Q9BYJ9 559 aaKnown RBP18.33■□□□□ 0.53
SHISA4-201ENST00000362011 RNF122Q9H9V4 155 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 EMC3Q9P0I2 261 aa18.33■□□□□ 0.53
SHISA4-201ENST00000362011 PRSS37A4D1T9 235 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 OR6C68A6NDL8 312 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 WIPF3A6NGB9 483 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 SNTNA6NMZ2 147 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 PRODHO43272 600 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 AHCYL1O43865 530 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 WDR1O75083 606 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 IGHG1P01857 330 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 EDN3P14138 238 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 SLC25A1P53007 311 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 CLRN1P58418 232 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 ACSF3Q4G176 576 aaPredicted RBP18.32■□□□□ 0.52
SHISA4-201ENST00000362011 NIPAL3Q6P499 406 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 CD163Q86VB7 1156 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 ZIC4Q8N9L1 334 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 NOXO1Q8NFA2 376 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 BPIFB6Q8NFQ5 453 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 OR9Q1Q8NGQ5 310 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 RFKQ969G6 155 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 SLC25A44Q96H78 314 aaPredicted RBP18.32■□□□□ 0.52
SHISA4-201ENST00000362011 KCNK17Q96T54 332 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 ALG12Q9BV10 488 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 HCAR1Q9BXC0 346 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 RPRD1BQ9NQG5 326 aaKnown RBP18.32■□□□□ 0.52
SHISA4-201ENST00000362011 SCN3BQ9NY72 215 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 VSX1Q9NZR4 365 aaPredicted RBP18.32■□□□□ 0.52
SHISA4-201ENST00000362011 BLOC1S6Q9UL45 172 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 RCE1Q9Y256 329 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 MYRFQ9Y2G1 1151 aa18.32■□□□□ 0.52
SHISA4-201ENST00000362011 FIGNL2A6NMB9 653 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 ZNF724A8MTY0 619 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 CENPBD1B2RD01 187 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 SMNDC1O75940 238 aaKnown RBP eCLIP18.31■□□□□ 0.52
SHISA4-201ENST00000362011 TNFAIP8O95379 198 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 TGM6O95932 706 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 CCDC159P0C7I6 412 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 PTGER4P35408 488 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 NUDT6P53370 316 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 CDH11P55287 796 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 RBPJQ06330 500 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 RUNX1T1Q06455 604 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 LGALS3BPQ08380 585 aa18.31■□□□□ 0.52
SHISA4-201ENST00000362011 CAMK2DQ13557 499 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms