RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CSNK1A1P48729 337 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 WDR4P57081 412 aaKnown RBP18.06■□□□□ 0.48
CD47-202ENST00000361309 NCALDP61601 193 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 CEP85LQ5SZL2 805 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 USP43Q70EL4 1123 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 PXKQ7Z7A4 578 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 SKA3Q8IX90 412 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 C10orf53Q8N6V4 93 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 FGFBP3Q8TAT2 258 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 OR52B2Q96RD2 323 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 TMEM27Q9HBJ8 222 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 MRPL39Q9NYK5 338 aaKnown RBP18.06■□□□□ 0.48
CD47-202ENST00000361309 TAAR3PQ9P1P4 343 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 TESQ9UGI8 421 aaKnown RBP18.06■□□□□ 0.48
CD47-202ENST00000361309 FBXL3Q9UKT7 428 aa18.06■□□□□ 0.48
CD47-202ENST00000361309 TRIM77I1YAP6 450 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 PLPP3O14495 311 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 UBDO15205 165 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 CDC14BO60729 498 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 CLPTM1O96005 669 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 SERPINA5P05154 406 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 ARAFP10398 606 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 OR1Q1Q15612 314 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 NKPD1Q17RQ9 610 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 RGS7BPQ6MZT1 257 aaPredicted RBP18.05■□□□□ 0.48
CD47-202ENST00000361309 MAVSQ7Z434 540 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 SGMS2Q8NHU3 365 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 SPATA5L1Q9BVQ7 753 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 G6PC2Q9NQR9 355 aa18.05■□□□□ 0.48
CD47-202ENST00000361309 A0A0B4J2E0 115 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 A0A1B0GX12 115 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 C11orf98E9PRG8 122 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 FAM157BP0CG42 384 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 ANPEPP15144 967 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 BIDP55957 195 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 RGS8P57771 180 aaPredicted RBP18.04■□□□□ 0.48
CD47-202ENST00000361309 CCL8P80075 99 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 GCNT6Q5T4J0 391 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 AVPI1Q5T686 147 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 REEP3Q6NUK4 255 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 ACSM5Q6NUN0 579 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 WDR88Q6ZMY6 472 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 PIWIL3Q7Z3Z3 882 aaKnown RBP18.04■□□□□ 0.48
CD47-202ENST00000361309 KRT73Q86Y46 540 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 C10orf111Q8N326 155 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 GOLGA6L1Q8N7Z2 621 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 TSPAN32Q96QS1 320 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 WFDC6Q9BQY6 131 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 RBM4Q9BWF3 364 aaKnown RBP18.04■□□□□ 0.48
CD47-202ENST00000361309 ZNF665Q9H7R5 613 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 SLC25A37Q9NYZ2 338 aa18.04■□□□□ 0.48
CD47-202ENST00000361309 C17orf100A8MU93 164 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 TPST2O60704 377 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 ADORA3P0DMS8 318 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 ARFIP2P53365 341 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 CDH12P55289 794 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 CDK6Q00534 326 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 MVKQ03426 396 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 MSRB3Q8IXL7 192 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 SLC22A24Q8N4F4 322 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 PAQR4Q8N4S7 273 aaPredicted RBP18.03■□□□□ 0.48
CD47-202ENST00000361309 TEX29Q8N6K0 151 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 TMEM54Q969K7 222 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 JMJD8Q96S16 334 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 TMEM43Q9BTV4 400 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 OR51B6Q9H340 312 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 HINT3Q9NQE9 182 aaKnown RBP18.03■□□□□ 0.48
CD47-202ENST00000361309 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.03■□□□□ 0.48
CD47-202ENST00000361309 GPR160Q9UJ42 338 aa18.03■□□□□ 0.48
CD47-202ENST00000361309 V9GYY5 206 aaPredicted RBP18.03■□□□□ 0.48
CD47-202ENST00000361309 MPZL1O95297 269 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 CCL2P13500 99 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 SELENOVP59797 346 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 TMEM154Q6P9G4 183 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 SLC30A7Q8NEW0 376 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 OR5J2Q8NH18 312 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 TRIM44Q96DX7 344 aaPredicted RBP18.02■□□□□ 0.48
CD47-202ENST00000361309 SH3GL3Q99963 347 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 TMPRSS13Q9BYE2 586 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 SLC52A3Q9NQ40 469 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 GLTPQ9NZD2 209 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 SLAMF8Q9P0V8 285 aa18.02■□□□□ 0.48
CD47-202ENST00000361309 TMEM120BA0PK00 339 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 SLC22A23A1A5C7 686 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 PLPP2O43688 288 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 OR8G3PP0DMU2 310 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 ZNF250P15622 560 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 KLF3P57682 345 aaPredicted RBP18.01■□□□□ 0.47
CD47-202ENST00000361309 ERVS71-1P61550 626 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 LRIF1Q5T3J3 769 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 SLC35D2Q76EJ3 337 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 C1QL2Q7Z5L3 287 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 OR6X1Q8NH79 312 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 SYNPRQ8TBG9 265 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 SNX33Q8WV41 574 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 CDH20Q9HBT6 801 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 TMEM38BQ9NVV0 291 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 SLC13A4Q9UKG4 626 aa18.01■□□□□ 0.47
CD47-202ENST00000361309 IGLV3-9A0A075B6K5 115 aa18■□□□□ 0.47
CD47-202ENST00000361309 A0A0G2JMP0 313 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms