RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TNRC6BQ9UPQ9 1833 aaKnown RBP20.45■□□□□ 0.86
LDB1-201ENST00000361198 TRAV36DV7A0A075B6V5 113 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 ADAM10O14672 748 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 CTDSPLO15194 276 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 GSTZ1O43708 216 aaPredicted RBP20.45■□□□□ 0.86
LDB1-201ENST00000361198 STOMP27105 288 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 DGCR2P98153 550 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 HSD17B12Q53GQ0 312 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 CD276Q5ZPR3 534 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 SYT9Q86SS6 491 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 NFAM1Q8NET5 270 aaPredicted RBP20.45■□□□□ 0.86
LDB1-201ENST00000361198 MAFAQ8NHW3 353 aaPredicted RBP20.45■□□□□ 0.86
LDB1-201ENST00000361198 PHYHIPQ92561 330 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 PTDSS2Q9BVG9 487 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 TAS2R5Q9NYW4 299 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 ADAMTS9Q9P2N4 1935 aa20.45■□□□□ 0.86
LDB1-201ENST00000361198 SLC25A12O75746 678 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 EMC4Q5J8M3 183 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 ZNF782Q6ZMW2 699 aaPredicted RBP20.44■□□□□ 0.86
LDB1-201ENST00000361198 GPR119Q8TDV5 335 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 ADAMTS14Q8WXS8 1223 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 SLC25A36Q96CQ1 311 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 SMAD5Q99717 465 aaKnown RBP20.44■□□□□ 0.86
LDB1-201ENST00000361198 IER2Q9BTL4 223 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 BRD7Q9NPI1 651 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 SLCO1C1Q9NYB5 712 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 STMN3Q9NZ72 180 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 RARRES3Q9UL19 164 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 MOKQ9UQ07 419 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 A0A0B4J203 849 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 C19orf67A6NJJ6 358 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 HSF2Q03933 536 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 ADGRG3Q86Y34 549 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 OR6V1Q8N148 313 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 CCDC74BQ96LY2 380 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 CACNG6Q9BXT2 260 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 ZNF275Q9NSD4 429 aaPredicted RBP20.44■□□□□ 0.86
LDB1-201ENST00000361198 ING4Q9UNL4 249 aa20.44■□□□□ 0.86
LDB1-201ENST00000361198 TMED7-TICAM2A0A0A6YYA0 188 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 C11orf98E9PRG8 122 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 SUSD5O60279 629 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 ALOX12BO75342 701 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 GIFP27352 417 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 DCDP81605 110 aaKnown RBP20.43■□□□□ 0.86
LDB1-201ENST00000361198 ZNF684Q5T5D7 378 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 OR5M10Q6IEU7 315 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 SLC16A9Q7RTY1 509 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 RPS4Y2Q8TD47 263 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 RELTQ969Z4 430 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 ZFP3Q96NJ6 502 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 OR14A2Q96R54 314 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 OR51J1Q9H342 316 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 RANBP3Q9H6Z4 567 aaPredicted RBP20.43■□□□□ 0.86
LDB1-201ENST00000361198 ZFP64Q9NPA5 681 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 SUSD2Q9UGT4 822 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 TMED7Q9Y3B3 224 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 TMEM72A0PK05 275 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 GPRIN2O60269 458 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 NPIPB7O75200 414 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 POLR2HP52434 150 aaKnown RBP20.43■□□□□ 0.86
LDB1-201ENST00000361198 DYRK1AQ13627 763 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 LYPD8Q6UX82 237 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 TIGD4Q8IY51 512 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 EID2Q8N6I1 236 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 CEP76Q8TAP6 659 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 PHF21AQ96BD5 680 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 MRPL48Q96GC5 212 aaKnown RBP20.43■□□□□ 0.86
LDB1-201ENST00000361198 GAREM1Q9H706 876 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 APMAPQ9HDC9 416 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 TAS2R10Q9NYW0 307 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 PTTG3PQ9NZH4 202 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 CLEC4AQ9UMR7 237 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 KLHDC2Q9Y2U9 406 aa20.43■□□□□ 0.86
LDB1-201ENST00000361198 PCDHGA9Q9Y5G4 932 aaKnown RBP20.43■□□□□ 0.86
LDB1-201ENST00000361198 TVP23AA6NH52 213 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 FBXW4P57775 412 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 NANOS3P60323 173 aaKnown RBP20.42■□□□□ 0.86
LDB1-201ENST00000361198 KLF9Q13886 244 aaPredicted RBP20.42■□□□□ 0.86
LDB1-201ENST00000361198 SLC22A10Q63ZE4 541 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 OR2I1PQ8NGU4 316 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 SMIM4Q8WVI0 70 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 TTC9Q92623 222 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 RNF166Q96A37 237 aaPredicted RBP20.42■□□□□ 0.86
LDB1-201ENST00000361198 IRF2BPLQ9H1B7 796 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 SYT4Q9H2B2 425 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 RABL2AQ9UBK7 228 aaPredicted RBP20.42■□□□□ 0.86
LDB1-201ENST00000361198 SLC23A1Q9UHI7 598 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 RABL2BQ9UNT1 228 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 CACNA1CQ13936 2221 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 C2orf72A6NCS6 295 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 COL28A1Q2UY09 1125 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 ZNF385CQ66K41 422 aaPredicted RBP20.42■□□□□ 0.86
LDB1-201ENST00000361198 GPR139Q6DWJ6 353 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 MAMDC2Q7Z304 686 aaPredicted RBP20.42■□□□□ 0.86
LDB1-201ENST00000361198 GRINAQ7Z429 371 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 WDR5BQ86VZ2 330 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 GPR137Q96N19 417 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 TEKT2Q9UIF3 430 aa20.42■□□□□ 0.86
LDB1-201ENST00000361198 MRPS7Q9Y2R9 242 aaKnown RBP20.42■□□□□ 0.86
LDB1-201ENST00000361198 AK6Q9Y3D8 172 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms