RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CCR4P51679 360 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 NRG3P56975 720 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 PRPS1P60891 318 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 RNF4P78317 190 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 GALEQ14376 348 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 PCOLCEQ15113 449 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 PPP1R32Q7Z5V6 425 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 APCDD1LQ8NCL9 501 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 OR11G2Q8NGC1 345 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 THAP3Q8WTV1 239 aaPredicted RBP12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 UFD1Q92890 307 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 UPRTQ96BW1 309 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 NXPE2Q96DL1 559 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 SECISBP2Q96T21 854 aaKnown RBP12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 TEAD3Q99594 435 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 TBL1XR1Q9BZK7 514 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 GALNT9Q9HCQ5 603 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 FANCFQ9NPI8 374 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 FAM240BA0A1B0GVZ2 78 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 C21orf140B9A014 251 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 COX6A1P12074 109 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 SLC2A5P22732 501 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 PLA2G5P39877 138 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 RPS4XP62701 263 aaKnown RBP12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF117Q03924 483 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 LAMTOR1Q6IAA8 161 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 ACBD7Q8N6N7 88 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 OR5M3Q8NGP4 307 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF563Q8TA94 476 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 NUBPLQ8TB37 319 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 PCNPQ8WW12 178 aaKnown RBP12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 KISS1RQ969F8 398 aaPredicted RBP12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 ERMAPQ96PL5 475 aaPredicted RBP12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 GPX7Q96SL4 187 aaPredicted RBP12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 MED20Q9H944 212 aa12.55□□□□□ -0.4
CSNK1E-201ENST00000359867 LOC102723996A0A087X1L8 192 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 IGHV1-45A0A0A0MS14 117 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 A0A1B0GVC2 190 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 A6NIN4 97 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 ARPC3O15145 178 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 TSC22D2O75157 780 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 HOXD4P09016 255 aaPredicted RBP12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 LIPCP11150 499 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 LIFP15018 202 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 CELP19835 753 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 BDH1Q02338 343 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 POU4F2Q12837 409 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 C16orf47Q6ZP98 133 aaPredicted RBP12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF767PQ75MW2 155 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 OR51G2Q8NGK0 314 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 WACQ9BTA9 647 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 GPR87Q9BY21 358 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 MCUBQ9NWR8 336 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 MRPL39Q9NYK5 338 aaKnown RBP12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 DMXL2Q8TDJ6 3036 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 LYRM1O43325 122 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 AKAP8O43823 692 aaKnown RBP12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 FADS1O60427 444 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 SERPINI2O75830 405 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 PAHP00439 452 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 CD63P08962 238 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 PGCP20142 388 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 SLC26A5P58743 744 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 CRMP1Q14194 572 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 ATP1A1-AS1Q5TC04 95 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF57Q68EA5 555 aaPredicted RBP12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 MARCH3Q86UD3 253 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 SIRT6Q8N6T7 355 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 OR8K3Q8NH51 312 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 OR5W2Q8NH69 310 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 HCAR1Q9BXC0 346 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 B3GNT2Q9NY97 397 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF224Q9NZL3 707 aa12.54□□□□□ -0.4
CSNK1E-201ENST00000359867 HCRTR2O43614 444 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 CDC40O60508 579 aaKnown RBP eCLIP12.53□□□□□ -0.42e-7■■□□□ 14
CSNK1E-201ENST00000359867 MST1P26927 711 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 INPP1P49441 399 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 SSPNQ14714 243 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF74Q16587 644 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 KLHL12Q53G59 568 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 MISPQ8IVT2 679 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 LRRC17Q8N6Y2 441 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 ATF6BQ99941 703 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 RTN4RQ9BZR6 473 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 GHITMQ9H3K2 345 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 ZNF160Q9HCG1 818 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 NRIP3Q9NQ35 241 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 GSTK1Q9Y2Q3 226 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 SLC6A5Q9Y345 797 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 IER3IP1Q9Y5U9 82 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 NPFFR2Q9Y5X5 522 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 APC2O95996 2303 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 A0A0B4J203 849 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 TRBV11-1A0A0K0K1C0 115 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 ARHGEF9O43307 516 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 TACR3P29371 465 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 GABRA5P31644 462 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 ID4P47928 161 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 PPP3R1P63098 170 aa12.53□□□□□ -0.4
CSNK1E-201ENST00000359867 BTN1A1Q13410 526 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms