RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 C12orf73Q69YU5 71 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 HDDC2Q7Z4H3 204 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 FJX1Q86VR8 437 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 TMEM123Q8N131 208 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 OR6K3Q8NGY3 331 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 STARD4Q96DR4 205 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 LRR1Q96L50 414 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 DDOQ99489 341 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 SFXN3Q9BWM7 321 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF629Q9UEG4 869 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 NDRG4Q9ULP0 352 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 ICE1Q9Y2F5 2266 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 SPTBN1Q01082 2364 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 SPTAN1Q13813 2472 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 HIVEP3Q5T1R4 2406 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 TEX13CA0A0J9YWL9 993 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 LOC100130705A0A1B0GUX0 176 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 AHCYL1O43865 530 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 TRMUO75648 421 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 CGAP01215 116 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 HIST1H1CP16403 213 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 EDNRAP25101 427 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 NOS3P29474 1203 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 OPRM1P35372 400 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 CDKN2AP42771 156 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 OR3A2P47893 321 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 AQP4P55087 323 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 SIRPAP78324 504 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 ADARB1P78563 741 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 EFNB1P98172 346 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 CAMK2DQ13557 499 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 KRR1Q13601 381 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 MESTQ5EB52 335 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC35F1Q5T1Q4 408 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 NIPAL3Q6P499 406 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 VWA1Q6PCB0 445 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 BTLAQ7Z6A9 289 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 C20orf196Q8IYI0 205 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 DHRSXQ8N5I4 330 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 CNEP1R1Q8N9A8 125 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 HDAC2Q92769 488 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 RASD2Q96D21 266 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 SNX18Q96RF0 628 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 KCNK17Q96T54 332 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 PITX2Q99697 317 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 ALG12Q9BV10 488 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 TEX12Q9BXU0 123 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 CMC2Q9NRP2 79 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 FOXD3Q9UJU5 478 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 PCNX1Q96RV3 2341 aa10.98□□□□□ -0.65
NIF3L1-201ENST00000359683 FREM1Q5H8C1 2179 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 OR6C65A6NJZ3 312 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 H0YAE9 185 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 SURF4O15260 269 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 ARHGEF9O43307 516 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC43A1O75387 559 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 IGHG1P01857 330 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 PGA4P0DJD7 388 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 PGA3P0DJD8 388 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 CD8BP10966 210 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 GGT2P36268 569 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 ADORA2A-AS1P86434 159 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 HIST3H3Q16695 136 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 TTC23Q5W5X9 447 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 CASP12Q6UXS9 341 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 IZUMO2Q6UXV1 221 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 PTCHD4Q6ZW05 846 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 ADCK1Q86TW2 530 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 NPEPL1Q8NDH3 523 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF555Q8NEP9 628 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 OR52E2Q8NGJ4 325 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 OR4K13Q8NH42 304 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 TMEM54Q969K7 222 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF566Q969W8 418 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 APH1AQ96BI3 265 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 NMD3Q96D46 503 aaKnown RBP10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 LINC00470Q9BZP3 86 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 TVP23BQ9NYZ1 205 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 KLHL21Q9UJP4 597 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 RNF6Q9Y252 685 aa10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 USP9XQ93008 2570 aaPredicted RBP10.97□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC22A23A1A5C7 686 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 PRSS37A4D1T9 235 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 XKRYO14609 159 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC2A10O95528 541 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 KEAP1Q14145 624 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 TSPO2Q5TGU0 170 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 CARD17Q5XLA6 110 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 MTFR2Q6P444 385 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 TFAP2EQ6VUC0 442 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 CCDC71Q8IV32 467 aaPredicted RBP10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 LIX1LQ8IVB5 337 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 ZNF100Q8IYN0 542 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 POMGNT2Q8NAT1 580 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC37A3Q8NCC5 494 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 FNDC8Q8TC99 324 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 TFAP2CQ92754 450 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 CCDC120Q96HB5 630 aa10.96□□□□□ -0.65
NIF3L1-201ENST00000359683 SLC38A2Q96QD8 506 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms