RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PIGCQ92535 297 aa11.9□□□□□ -0.51
SMC4-202ENST00000357388 HLA-CQ95604 372 aa11.9□□□□□ -0.51
SMC4-202ENST00000357388 ISG20Q96AZ6 181 aaKnown RBP11.9□□□□□ -0.51
SMC4-202ENST00000357388 ALG12Q9BV10 488 aa11.9□□□□□ -0.51
SMC4-202ENST00000357388 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.51
SMC4-202ENST00000357388 TMEM129A0AVI4 362 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 TMEM221A6NGB7 291 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 OR5H14A6NHG9 310 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 ZNF891A8MT65 544 aaPredicted RBP11.89□□□□□ -0.51
SMC4-202ENST00000357388 I6L893 689 aaPredicted RBP11.89□□□□□ -0.51
SMC4-202ENST00000357388 K7ERQ8 282 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 GSK3AP49840 483 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 IQCJQ1A5X6 159 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 OR5B3Q8NH48 314 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 ST8SIA2Q92186 375 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 SEH1LQ96EE3 360 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 TMEM43Q9BTV4 400 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 TREX1Q9NSU2 369 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 SH3BGRL2Q9UJC5 107 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 VDAC3Q9Y277 283 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 TRBV4-1A0A0J9YWV2 114 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 FAM183AA6NL82 134 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 H3BQ06 376 aaPredicted RBP11.89□□□□□ -0.51
SMC4-202ENST00000357388 CTXN2P0C2S0 81 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 ZP3P21754 424 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 PTTG1IPP53801 180 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 AANATQ16613 207 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 FER1L6-AS2Q96M78 137 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 SEMA6CQ9H3T2 930 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 HRASLSQ9HDD0 168 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 IL17CQ9P0M4 197 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 B3GALT5Q9Y2C3 310 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 ARL2-SNX15V9GYD0 113 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 FRS3O43559 492 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 OR8G3PP0DMU2 310 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 FPR3P25089 353 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 OR13D1Q8NGV5 346 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 TMEM106AQ96A25 262 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 LRFN5Q96NI6 719 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 BOCQ9BWV1 1114 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 ZNF593O00488 134 aaPredicted RBP11.89□□□□□ -0.51
SMC4-202ENST00000357388 MRPL33O75394 65 aaKnown RBP11.89□□□□□ -0.51
SMC4-202ENST00000357388 OR7C1O76099 320 aaPredicted RBP11.89□□□□□ -0.51
SMC4-202ENST00000357388 MTHFD2P13995 350 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 TAS2R45P59539 299 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.89□□□□□ -0.514e-9■■■■■ 118.1
SMC4-202ENST00000357388 DPY19L2P2Q6ZN68 376 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 ZNF836Q6ZNA1 936 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 OR2L13Q8N349 312 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 SLC35G3Q8N808 338 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 ZNF485Q8NCK3 441 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 ZNF596Q8TC21 504 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 ARSGQ96EG1 525 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 TCTN2Q96GX1 697 aa11.89□□□□□ -0.51
SMC4-202ENST00000357388 A0A0A6YYC8 382 aaPredicted RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 OR5K3A6NET4 321 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 I3L1I5 382 aaPredicted RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 TGM1P22735 817 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 PTAFRP25105 342 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 ITGB8P26012 769 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 SOX4Q06945 474 aaPredicted RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 SQSTM1Q13501 440 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 LYRM7Q5U5X0 104 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 CHST14Q8NCH0 376 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 APH1AQ96BI3 265 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 REEP6Q96HR9 211 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 TIMM29Q9BSF4 260 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 CACFD1Q9UGQ2 172 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 GPR55Q9Y2T6 319 aaPredicted RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 DVL1O14640 695 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 ZNF865P0CJ78 1059 aaPredicted RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 IL3RAP26951 378 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 HOXA11P31270 313 aaPredicted RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 NKX2-1P43699 371 aaPredicted RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 DVL1P1P54792 670 aaPredicted RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 KCNJ10P78508 379 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 SLC35G1Q2M3R5 365 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 VRK2Q86Y07 508 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 CPXM2Q8N436 756 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 OR52R1Q8NGF1 315 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 AKR7LQ8NHP1 331 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 DOK4Q8TEW6 326 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 CABLES2Q9BTV7 478 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 C20orf24Q9BUV8 137 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 A4GALTQ9NPC4 353 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 DNMT3BQ9UBC3 853 aaKnown RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 NXT1Q9UKK6 140 aaKnown RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 LHX6Q9UPM6 363 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 A0A1W2PPH5 198 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 XKRY2A2RUG3 117 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 DCTN6O00399 190 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 CIDEAO60543 219 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 CYBAP13498 195 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 RAC1P63000 192 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 BAMBIQ13145 260 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 IKZF1Q13422 519 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 TMEM182Q6ZP80 229 aaPredicted RBP11.88□□□□□ -0.51
SMC4-202ENST00000357388 Q6ZRG5 221 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 NPWQ8N729 165 aa11.88□□□□□ -0.51
SMC4-202ENST00000357388 NANOGP1Q8N7R0 232 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms