RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SLC38A5Q8WUX1 472 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 GGHQ92820 318 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 TRIB3Q96RU7 358 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 A0A096LPE4 126 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 A0A1W2PPZ6 126 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SLC16A6O15403 523 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 EGFP01133 1207 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 NFYAP23511 347 aaPredicted RBP15.99■□□□□ 0.15
COL27A1-201ENST00000356083 LSMEM2Q8N112 164 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 ARFGAP1Q8N6T3 406 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SFT2D1Q8WV19 159 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 MAGIXQ9H6Y5 334 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 IGKV3-7A0A075B6H7 116 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 OR6C76A6NM76 312 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 IGHEP01854 428 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 MOB3BQ86TA1 216 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 SLC6A18Q96N87 628 aa15.99■□□□□ 0.15
COL27A1-201ENST00000356083 F5H697 171 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 GFRA2O00451 464 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 SELPLGQ14242 412 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF420Q8TAQ5 688 aaPredicted RBP15.98■□□□□ 0.15
COL27A1-201ENST00000356083 FGGYQ96C11 551 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 VAPAQ9P0L0 249 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ACOD1A6NK06 481 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 OR13C7P0DN81 318 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 KCNJ8Q15842 424 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 C4orf17Q53FE4 359 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 TMEM200AQ86VY9 491 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 SRRQ9GZT4 340 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 CRLF2Q9HC73 371 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ENTPD2Q9Y5L3 495 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 DEFB103AP81534 67 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 MFAP5Q13361 173 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 C6orf89Q6UWU4 347 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ADGRG3Q86Y34 549 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 OR6V1Q8N148 313 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 PIGQQ9BRB3 760 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ABCA4P78363 2273 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 GALR3O60755 368 aaPredicted RBP15.98■□□□□ 0.15
COL27A1-201ENST00000356083 NUDT1P36639 197 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ACOXLQ9NUZ1 547 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ASIC5Q9NY37 505 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ZCWPW2A0A1B0GU75 182 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 KLK10O43240 276 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 SMAD6O43541 496 aaKnown RBP15.98■□□□□ 0.15
COL27A1-201ENST00000356083 FZD7O75084 574 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 LAP3P28838 519 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ERHP84090 104 aaKnown RBP15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ACSM1Q08AH1 577 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 FAM43BQ6ZT52 329 aaPredicted RBP15.98■□□□□ 0.15
COL27A1-201ENST00000356083 DOCK6Q96HP0 2047 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 SOX15O60248 233 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 FGF3P11487 239 aaPredicted RBP15.98■□□□□ 0.15
COL27A1-201ENST00000356083 HSD11B1LQ7Z5J1 315 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 GPR32P1Q8NGA4 272 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 CCDC74BQ96LY2 380 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 NIPSNAP3BQ9BS92 247 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 EDEM2Q9BV94 578 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ZCCHC4Q9H5U6 513 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF835Q9Y2P0 537 aa15.98■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF207O43670 478 aaKnown RBP15.97■□□□□ 0.15
COL27A1-201ENST00000356083 CA5AP35218 305 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 SPATS1Q496A3 300 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 OR13C9Q8NGT0 318 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 ARFGEF2Q9Y6D5 1785 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 BLOC1S3Q6QNY0 202 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 LRRTM1Q86UE6 522 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 OR2T6Q8NHC8 308 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 MOB3AQ96BX8 217 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 OR51E2Q9H255 320 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 SLC23A1Q9UHI7 598 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 H0YGG7 62 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 RNASEK-C17orf49H0YIS7 233 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 P2RX6O15547 441 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 C1orf105O95561 183 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 FABP1P07148 127 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 UBBP0CG47 229 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 SNHG28P0DPA3 235 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 ITGB7P26010 798 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 RHOBP62745 196 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 C19orf47Q8N9M1 422 aaKnown RBP15.97■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF582Q96NG8 517 aaPredicted RBP15.97■□□□□ 0.15
COL27A1-201ENST00000356083 BCL7BQ9BQE9 202 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 NIPAL2Q9H841 368 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
COL27A1-201ENST00000356083 TRAPPC2P0DI81 140 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 TRAPPC2BP0DI82 140 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 ATP4BP51164 291 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 GTF2H5Q6ZYL4 71 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 PCNPQ8WW12 178 aaKnown RBP15.97■□□□□ 0.15
COL27A1-201ENST00000356083 CPEP16870 476 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 JAG1P78504 1218 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 CLEC12BQ2HXU8 276 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 ALKAL2Q6UX46 152 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 MRPS28Q9Y2Q9 187 aaKnown RBP15.97■□□□□ 0.15
COL27A1-201ENST00000356083 LOC285095A0A1B0GVY8 99 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 I6L893 689 aaPredicted RBP15.97■□□□□ 0.15
COL27A1-201ENST00000356083 CLVS2Q5SYC1 327 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 WDR5BQ86VZ2 330 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 CDC20BQ86Y33 519 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms