RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 GPR137CQ8N3F9 429 aa19.52■□□□□ 0.71
SHMT1-203ENST00000354098 ARIH2OSQ8N7S6 290 aa19.52■□□□□ 0.71
SHMT1-203ENST00000354098 TMEM54Q969K7 222 aa19.52■□□□□ 0.71
SHMT1-203ENST00000354098 LRRC46Q96FV0 321 aa19.52■□□□□ 0.71
SHMT1-203ENST00000354098 LRR1Q96L50 414 aa19.52■□□□□ 0.71
SHMT1-203ENST00000354098 ERMAPQ96PL5 475 aaPredicted RBP19.52■□□□□ 0.71
SHMT1-203ENST00000354098 TSSK6Q9BXA6 273 aa19.52■□□□□ 0.71
SHMT1-203ENST00000354098 OR6C65A6NJZ3 312 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 MITFO75030 526 aaPredicted RBP19.51■□□□□ 0.71
SHMT1-203ENST00000354098 IGHG1P01857 330 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 ANPEPP15144 967 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 UGT2B10P36537 528 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 CSNK1A1P48729 337 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 MYBPC1Q00872 1141 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 ROR2Q01974 943 aaKnown RBP19.51■□□□□ 0.71
SHMT1-203ENST00000354098 ITGADQ13349 1161 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 P2RY6Q15077 328 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 MESTQ5EB52 335 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 SFRP5Q5T4F7 317 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 RPL13AP3Q6NVV1 102 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 MAGEE2Q8TD90 523 aaPredicted RBP19.51■□□□□ 0.71
SHMT1-203ENST00000354098 ZNF570Q96NI8 536 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 KCNK17Q96T54 332 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 CRLF2Q9HC73 371 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 GPR35Q9HC97 309 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 PAPOLBQ9NRJ5 636 aaKnown RBP19.51■□□□□ 0.71
SHMT1-203ENST00000354098 TBC1D23Q9NUY8 699 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 GLTPQ9NZD2 209 aa19.51■□□□□ 0.71
SHMT1-203ENST00000354098 USP9YO00507 2555 aaPredicted RBP19.51■□□□□ 0.71
SHMT1-203ENST00000354098 H3BN98 237 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 H7C1C5 153 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 BHLHE40O14503 412 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 SOCS2O14508 198 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 ARHGEF9O43307 516 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 OSMP13725 252 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 CDH2P19022 906 aaPredicted RBP19.5■□□□□ 0.71
SHMT1-203ENST00000354098 COX5AP20674 150 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 SDHAP31040 664 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 RPS6KA3P51812 740 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 CLRN1P58418 232 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 LCN6P62502 163 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 HIST3H3Q16695 136 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 KDM4DQ6B0I6 523 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 LRFN4Q6PJG9 635 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 ZNF433Q8N7K0 673 aaPredicted RBP19.5■□□□□ 0.71
SHMT1-203ENST00000354098 NOXO1Q8NFA2 376 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 OR52L1Q8NGH7 329 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 OR4Q3Q8NH05 313 aa19.5■□□□□ 0.71
SHMT1-203ENST00000354098 TMEFF2Q9UIK5 374 aaPredicted RBP19.5■□□□□ 0.71
SHMT1-203ENST00000354098 ZNF587BE7ETH6 402 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 C16orf97H3BN30 126 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 POU1F1P28069 291 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 PPP2R2BQ00005 443 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 SLC35F1Q5T1Q4 408 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 GPR139Q6DWJ6 353 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 C22orf34Q6ZV56 151 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 HDDC2Q7Z4H3 204 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 OSBPL10Q9BXB5 764 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 ULBP2Q9BZM5 246 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 KRT84Q9NSB2 600 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 TAS2R16Q9NYV7 291 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 POFUT2Q9Y2G5 429 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 RPL36A-HNRNPH2H7BZ11 118 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 IMPA2O14732 288 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 ARPC3O15145 178 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 RAD51DO75771 328 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 TXNDC12O95881 172 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 APEHP13798 732 aaKnown RBP19.49■□□□□ 0.71
SHMT1-203ENST00000354098 PSMB1P20618 241 aaKnown RBP19.49■□□□□ 0.71
SHMT1-203ENST00000354098 COL8A1P27658 744 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 MPGP29372 298 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 FMODQ06828 376 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 KRR1Q13601 381 aaKnown RBP19.49■□□□□ 0.71
SHMT1-203ENST00000354098 CEACAM16Q2WEN9 425 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 PTCHD4Q6ZW05 846 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 IQCF1Q8N6M8 205 aa19.49■□□□□ 0.71
SHMT1-203ENST00000354098 KISS1RQ969F8 398 aaPredicted RBP19.49■□□□□ 0.71
SHMT1-203ENST00000354098 SPTAN1Q13813 2472 aaKnown RBP19.49■□□□□ 0.71
SHMT1-203ENST00000354098 DOPEY2Q9Y3R5 2298 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 IGKV1D-43A0A0B4J1Z2 117 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 A6NIZ1 184 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 QDPRP09417 244 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 HIST1H1CP16403 213 aaKnown RBP19.48■□□□□ 0.71
SHMT1-203ENST00000354098 IGFBP2P18065 325 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 CDKN2AP42771 156 aaKnown RBP19.48■□□□□ 0.71
SHMT1-203ENST00000354098 RAP1BP61224 184 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 RAP1AP62834 184 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 FAM205BPQ63HN1 556 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 BHLHA15Q7RTS1 189 aaPredicted RBP19.48■□□□□ 0.71
SHMT1-203ENST00000354098 ABHD12BQ7Z5M8 362 aaPredicted RBP19.48■□□□□ 0.71
SHMT1-203ENST00000354098 CBR4Q8N4T8 237 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 OR4K13Q8NH42 304 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 TEX47Q8TBZ9 253 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 DNAJC9Q8WXX5 260 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 MCHR2Q969V1 340 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 NMD3Q96D46 503 aaKnown RBP19.48■□□□□ 0.71
SHMT1-203ENST00000354098 B3GAT2Q9NPZ5 323 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 STX18Q9P2W9 335 aaKnown RBP19.48■□□□□ 0.71
SHMT1-203ENST00000354098 GPR52Q9Y2T5 361 aa19.48■□□□□ 0.71
SHMT1-203ENST00000354098 XKRYO14609 159 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms