RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 OR52E2Q8NGJ4 325 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 SLC2A12Q8TD20 617 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 MVB12AQ96EY5 273 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 DGAT2Q96PD7 388 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 MCCC2Q9HCC0 563 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 MKL2Q9ULH7 1088 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 PPIEQ9UNP9 301 aaKnown RBP7.81□□□□□ -1.16
TRIM55-204ENST00000353317 PCDHGA5Q9Y5G8 931 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 TRBV2A0A0J9YWF9 115 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 C17orf105B2RV13 164 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 FMO6PO60774 539 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 DDAH2O95865 285 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 HRGP04196 525 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF883P0CG24 379 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 HIST1H1CP16403 213 aaKnown RBP7.81□□□□□ -1.16
TRIM55-204ENST00000353317 LCN1P31025 176 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 CCR9P51686 369 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 BLVRAP53004 296 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 UBE2NLQ5JXB2 153 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 ARHGAP40Q5TG30 622 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 MED25Q71SY5 747 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 LINGO2Q7L985 606 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 COX18Q8N8Q8 333 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 OR4K13Q8NH42 304 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 STT3BQ8TCJ2 826 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 ZNRF4Q8WWF5 429 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 RADILQ96JH8 1075 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 DDOQ99489 341 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 GFI1Q99684 422 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 OR10A5Q9H207 317 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 OR10A4Q9H209 315 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 HRASLSQ9HDD0 168 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 NRIP3Q9NQ35 241 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 FAM86C1Q9NVL1 165 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF224Q9NZL3 707 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 FLRT3Q9NZU0 649 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 RPS6KB2Q9UBS0 482 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 KLK11Q9UBX7 282 aa7.81□□□□□ -1.16
TRIM55-204ENST00000353317 MRPS33Q9Y291 106 aaKnown RBP7.81□□□□□ -1.16
TRIM55-204ENST00000353317 A0A0B4J2E0 115 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 A0A1B0GX12 115 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 TCRBV16S1A1N1A0A5B0 115 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 M0R233 179 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 PIN1P1O15428 100 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 NKX2-2O95096 273 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 TGM6O95932 706 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF806P0C7X5 589 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 UBL4AP11441 157 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 SRMP19623 302 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 PSMB1P20618 241 aaKnown RBP7.8□□□□□ -1.16
TRIM55-204ENST00000353317 RORAP35398 523 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 PSMB10P40306 273 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 MAGEB1P43366 347 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 CAPZA2P47755 286 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 SLC37A1P57057 533 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 POU4F2Q12837 409 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 NKAIN1Q4KMZ8 207 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 HES5Q5TA89 166 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 PXDC1Q5TGL8 231 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 STPG1Q5TH74 334 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 OVCH1Q7RTY7 1134 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 SERPINA12Q8IW75 414 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 CDRT4Q8N9R6 151 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 OR52I2Q8NH67 350 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF721Q8TF20 911 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 CNOT9Q92600 299 aaKnown RBP7.8□□□□□ -1.16
TRIM55-204ENST00000353317 ERMAPQ96PL5 475 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-204ENST00000353317 MFRPQ9BY79 579 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 GSX2Q9BZM3 304 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 CHIAQ9BZP6 476 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 NRSN2Q9GZP1 204 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 NOX4Q9NPH5 578 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 DUSP22Q9NRW4 184 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF275Q9NSD4 429 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-204ENST00000353317 GNG8Q9UK08 70 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 RARRES3Q9UL19 164 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 GVINP1Q7Z2Y8 2422 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 LAMA5O15230 3695 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 CNTRLQ7Z7A1 2325 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 A0A1W2PPL8 197 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 IMPA2O14732 288 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 BRINP1O60477 761 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 IGKV3-11P04433 115 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 OR2T7P0C7T2 308 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 PTHLHP12272 177 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 GBX2P52951 348 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-204ENST00000353317 TSPAN5P62079 268 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 ACTA2P62736 377 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 ACTG2P63267 376 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 ACY1Q03154 408 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 NSDHLQ15738 373 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF613Q6PF04 617 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 BAIAP2L2Q6UXY1 529 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 BPHLQ86WA6 291 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-204ENST00000353317 SYS1Q8N2H4 156 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 LSMEM1Q8N8F7 131 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 PRSS33Q8NF86 280 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 OR2T4Q8NH00 348 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 OR2T27Q8NH04 317 aa7.8□□□□□ -1.16
TRIM55-204ENST00000353317 SNX33Q8WV41 574 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms