RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 SSNA1O43805 119 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ENPP1P22413 925 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 EXOSC6Q5RKV6 272 aaKnown RBP12.6□□□□□ -0.39
TRIM4-201ENST00000349062 MZT2AQ6P582 158 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 DPY19L2P2Q6ZN68 376 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 GRAMD2AQ8IUY3 354 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 OR6V1Q8N148 313 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ARIH2OSQ8N7S6 290 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ZNF417Q8TAU3 575 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 ZNF587Q96SQ5 575 aaPredicted RBP12.6□□□□□ -0.39
TRIM4-201ENST00000349062 CLEC4MQ9H2X3 399 aaPredicted RBP12.6□□□□□ -0.39
TRIM4-201ENST00000349062 MED29Q9NX70 200 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 TAS2R10Q9NYW0 307 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 KLHL21Q9UJP4 597 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 POLHQ9Y253 713 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 TMED7Q9Y3B3 224 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 NPFFR2Q9Y5X5 522 aa12.6□□□□□ -0.39
TRIM4-201ENST00000349062 TMEM131Q92545 1883 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 LANCL1O43813 399 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 OR2J2O76002 312 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 TRAPPC2P0DI81 140 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 TRAPPC2BP0DI82 140 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 F8A1P23610 371 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 HLA-DMAP28067 261 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 RBM34P42696 430 aaKnown RBP12.59□□□□□ -0.39
TRIM4-201ENST00000349062 SFXN4Q6P4A7 337 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 ZNF676Q8N7Q3 588 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 OR10AC1Q8NH08 325 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 DNASE2BQ8WZ79 361 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 EDAQ92838 391 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 HYLS1Q96M11 299 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 PELOQ9BRX2 385 aaKnown RBP12.59□□□□□ -0.39
TRIM4-201ENST00000349062 METTL7AQ9H8H3 244 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 CENPMQ9NSP4 180 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 KCNG2Q9UJ96 466 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 MMACHCQ9Y4U1 282 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 A0A0A6YYJ9 748 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 IGKV3-11P04433 115 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 RAB3BP20337 219 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 EPHA8P29322 1005 aaPredicted RBP12.59□□□□□ -0.39
TRIM4-201ENST00000349062 PPP3R1P63098 170 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 FMODQ06828 376 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 ZMYND11Q15326 602 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 NR0B2Q15466 257 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 CORO6Q6QEF8 472 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 FAM220AQ7Z4H9 259 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 LINC00346Q8IVM7 164 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 TCTE3Q8IZS6 198 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 SLC39A7Q92504 469 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 TSPAN32Q96QS1 320 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 FRYQ5TBA9 3013 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 TECTAO75443 2155 aa12.59□□□□□ -0.39
TRIM4-201ENST00000349062 FRG2CA6NGY1 282 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 CDK2AP1O14519 115 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 PNMTP11086 282 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 RAB14P61106 215 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.58□□□□□ -0.39
TRIM4-201ENST00000349062 LIPNQ5VXI9 398 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 TMEM71Q6P5X7 295 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 CREB3L2Q70SY1 520 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 C17orf82Q86X59 251 aaPredicted RBP12.58□□□□□ -0.39
TRIM4-201ENST00000349062 GUCD1Q96NT3 240 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 WDFY2Q96P53 400 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 OR1F2PQ96R84 312 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 AMELYQ99218 206 aa12.58□□□□□ -0.39
TRIM4-201ENST00000349062 IGHV5-10-1A0A0J9YXX1 117 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 B8ZZF3 427 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 AKR7A3O95154 331 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 DHFRP00374 187 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 ZNF28P17035 718 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 PGCP20142 388 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 NANOS3P60323 173 aaKnown RBP12.58□□□□□ -0.4
TRIM4-201ENST00000349062 PRPS1P60891 318 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 ACKR1Q16570 336 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 MESTQ5EB52 335 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 OR7E24Q6IFN5 339 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 COMMD7Q86VX2 200 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 PPP1R3BQ86XI6 285 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 GALNT11Q8NCW6 608 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 ZNF680Q8NEM1 530 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 OR14A16Q8NHC5 309 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 IFI44Q8TCB0 444 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 ZNF426Q9BUY5 554 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 NRIP3Q9NQ35 241 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 RDH8Q9NYR8 311 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 A0A1W2PNR3 127 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 SLC22A5O76082 557 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 AHSA1O95433 338 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 RENP00797 406 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 CCKBRP32239 447 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 DIO1P49895 249 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 C19orf57Q0VDD7 668 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 GPR176Q14439 515 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 CDONQ4KMG0 1287 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 GPALPP1Q8IXQ4 340 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 SLC41A2Q96JW4 573 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 ZNF285Q96NJ3 590 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 TWSG1Q9GZX9 223 aa12.58□□□□□ -0.4
TRIM4-201ENST00000349062 AGFG1P52594 562 aaKnown RBP12.57□□□□□ -0.4
TRIM4-201ENST00000349062 HSD17B12Q53GQ0 312 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms