RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ACTA2P62736 377 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 ACTG2P63267 376 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 HSF2Q03933 536 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 SSX1Q16384 188 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 ESPNLQ6ZVH7 1005 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 SLC16A9Q7RTY1 509 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 GPAT4Q86UL3 456 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 ZBTB46Q86UZ6 589 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 FDCSPQ8NFU4 85 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 SCMH1Q96GD3 660 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 DCUN1D5Q9BTE7 237 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 RERGLQ9H628 205 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 B9D1Q9UPM9 204 aa16.71■□□□□ 0.27
PTN-201ENST00000348225 DCTN6O00399 190 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 TNFSF11O14788 317 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 SELENOFO60613 162 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 ZNF43P17038 809 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 CD79BP40259 229 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 LSM3P62310 102 aaKnown RBP16.7■□□□□ 0.26
PTN-201ENST00000348225 BDH1Q02338 343 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 ZNF85Q03923 595 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 AQP6Q13520 282 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 TPBGQ13641 420 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 HYAL4Q2M3T9 481 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 ZNF766Q5HY98 468 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 LIPKQ5VXJ0 399 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 ATCAYQ86WG3 371 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 PHC2Q8IXK0 858 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 TM9SF4Q92544 642 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 MNTQ99583 582 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 MED29Q9NX70 200 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 A0A0J9YW62 118 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 EIF1AYO14602 144 aaKnown RBP16.7■□□□□ 0.26
PTN-201ENST00000348225 KLK10O43240 276 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 SLC16A7O60669 478 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 GLSO94925 669 aaPredicted RBP16.7■□□□□ 0.26
PTN-201ENST00000348225 PSMA1P25786 263 aaKnown RBP16.7■□□□□ 0.26
PTN-201ENST00000348225 BIDP55957 195 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 GFRA1P56159 465 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 RAC3P60763 192 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 H3F3AP84243 136 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 RPL3LQ92901 407 aaKnown RBP16.7■□□□□ 0.26
PTN-201ENST00000348225 KCNK17Q96T54 332 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 TRIM36Q9NQ86 728 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 BABAM2Q9NXR7 383 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 QPCTLQ9NXS2 382 aa16.7■□□□□ 0.26
PTN-201ENST00000348225 LOC100506127A0A0U1RQW1 187 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 FAM166BA8MTA8 275 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 ZNF670-ZNF695F2Z2N8 137 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 TRAF3IP2O43734 574 aaPredicted RBP16.69■□□□□ 0.26
PTN-201ENST00000348225 FREM3P0C091 2139 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 RFC3P40938 356 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 TNFSF10P50591 281 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 VBP1P61758 197 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 RUNX1T1Q06455 604 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 SPCS2Q15005 226 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 PDSS1Q5T2R2 415 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 HBMQ6B0K9 141 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 IGFL2Q6UWQ7 119 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 GDPGP1Q6ZNW5 385 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 ASB18Q6ZVZ8 466 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 GGNQ86UU5 652 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 SLC22A16Q86VW1 577 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 KLBQ86Z14 1044 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 TMEM251Q8N6I4 163 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 ZNF511Q8NB15 262 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 ZFP62Q8NB50 900 aaPredicted RBP16.69■□□□□ 0.26
PTN-201ENST00000348225 SLC39A7Q92504 469 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 TXNDC15Q96J42 360 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 ADAD1Q96M93 576 aaKnown RBP16.69■□□□□ 0.26
PTN-201ENST00000348225 CHCHD6Q9BRQ6 235 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 OR51E2Q9H255 320 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 ISG20L2Q9H9L3 353 aaKnown RBP16.69■□□□□ 0.26
PTN-201ENST00000348225 STUB1Q9UNE7 303 aa16.69■□□□□ 0.26
PTN-201ENST00000348225 IGLV1-36A0A0B4J1U3 117 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 CENPBD1B2RD01 187 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 ZNF814B7Z6K7 855 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 ACOT7O00154 380 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 IGHG1P01857 330 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 AGFG1P52594 562 aaKnown RBP16.68■□□□□ 0.26
PTN-201ENST00000348225 TAS2R43P59537 309 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 NCS1P62166 190 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 POU4F3Q15319 338 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 LYPD4Q6UWN0 246 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 NHLRC1Q6VVB1 395 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 TIGD4Q8IY51 512 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 SYS1Q8N2H4 156 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 SYT14Q8NB59 555 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 OR2V1Q8NHB1 315 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 SMAP2Q8WU79 429 aaPredicted RBP16.68■□□□□ 0.26
PTN-201ENST00000348225 SNX33Q8WV41 574 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 INTS14Q96SY0 518 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 TSPAN10Q9H1Z9 355 aaPredicted RBP16.68■□□□□ 0.26
PTN-201ENST00000348225 MARCH7Q9H992 704 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 TIGARQ9NQ88 270 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 KCNMB2Q9Y691 235 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 TMEM14AQ9Y6G1 99 aa16.68■□□□□ 0.26
PTN-201ENST00000348225 J3QLW9 94 aa16.67■□□□□ 0.26
PTN-201ENST00000348225 CEACAM4O75871 244 aa16.67■□□□□ 0.26
PTN-201ENST00000348225 HLA-DQA2P01906 255 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms