RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 C10orf53Q8N6V4 93 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 OR1L3Q8NH93 324 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SMIM4Q8WVI0 70 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 DVL3Q92997 716 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 AKIRIN1Q9H9L7 192 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 MKKSQ9NPJ1 570 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 FSCN3Q9NQT6 498 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 COQ3Q9NZJ6 369 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SLC5A6Q9Y289 635 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 COL5A1P20908 1838 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 IGKV3D-11A0A0A0MRZ8 115 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 PRAMEF2O60811 474 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 RGS11O94810 467 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 TIAF1O95411 115 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 OPN1LWP04000 364 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ALDOBP05062 364 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 GIMD1P0DJR0 217 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 CXCL2P19875 107 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF10P21506 573 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 CFL1P23528 166 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 INPP1P49441 399 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 GBX2P52951 348 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 P2RX3P56373 397 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 MAB21L1Q13394 359 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SNTB2Q13425 540 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 WDR38Q5JTN6 314 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 RPL13AP3Q6NVV1 102 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 TEX261Q6UWH6 196 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 C1orf122Q6ZSJ8 110 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 DTX1Q86Y01 620 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 OR51A2Q8NGJ7 313 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 SLC2A12Q8TD20 617 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 RBP7Q96R05 134 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 GAL3ST4Q96RP7 486 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 GPX7Q96SL4 187 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 CHIAQ9BZP6 476 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ADAM19Q9H013 955 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 METTL17Q9H7H0 456 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ZMAT3Q9HA38 289 aaKnown RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 Q9N2J8 555 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 KRCC1Q9NPI7 259 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-201ENST00000347613 NANSQ9NR45 359 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 POLE3Q9NRF9 147 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF281Q9Y2X9 895 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 RNF215Q9Y6U7 377 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 U3KQ87 197 aa5.46□□□□□ -1.54
CLCN3-201ENST00000347613 RPS10-NUDT3A0A1W2PQS6 291 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF749O43361 778 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 CTLA4P16410 223 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ALOX5APP20292 161 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 BTG1P62324 171 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 FMODQ06828 376 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 MOGAT2Q3SYC2 334 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 OR10K2Q6IF99 312 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 OVCH1Q7RTY7 1134 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 DND1Q8IYX4 353 aaKnown RBP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 MS4A15Q8N5U1 240 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 LINC00469Q8N7U9 141 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 OR7G1Q8NGA0 311 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 OR51D1Q8NGF3 324 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 THAP3Q8WTV1 239 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 SLC25A36Q96CQ1 311 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 KLHDC7BQ96G42 594 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ADAD1Q96M93 576 aaKnown RBP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 SOX7Q9BT81 388 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 DPCDQ9BVM2 203 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 MED28Q9H204 178 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 MTIF3Q9H2K0 278 aaKnown RBP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 NIPAL2Q9H841 368 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF304Q9HCX3 659 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 B9D1Q9UPM9 204 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 CAMK2AQ9UQM7 478 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 SDK2Q58EX2 2172 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 TRBV5-5A0A0J9YX44 114 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 EFCAB7A8K855 629 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 AIPO00170 330 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ARPC1BO15143 372 aaKnown RBP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ARHGEF9O43307 516 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 EFNA2O43921 213 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 CDC40O60508 579 aaKnown RBP eCLIP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 AK1P00568 194 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 IGLV3-19P01714 112 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 BGLAPP02818 100 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 CD14P08571 375 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 UBL4AP11441 157 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ITPKBP27987 946 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 SDHAP31040 664 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 OR3A3P47888 321 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 CSNK1EP49674 416 aaKnown RBP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 NR0B1P51843 470 aaKnown RBP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 NDUFA5Q16718 116 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ZSWIM7Q19AV6 140 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ZBTB37Q5TC79 503 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 DCAF12L2Q5VW00 463 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 LCN10Q6JVE6 187 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 CMIPQ8IY22 773 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF595Q8IYB9 648 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 PLPP7Q8NBV4 271 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF680Q8NEM1 530 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms