RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 STUB1Q9UNE7 303 aa19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 RASD1Q9Y272 281 aa19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 CNOT1A5YKK6 2376 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 FAM186AA6NE01 2351 aa19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 LINC01387J3KSC0 135 aa19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 CRABP1P29762 137 aa19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 UGT2B10P36537 528 aa19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 WIPI1Q5MNZ9 446 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 NHLRC1Q6VVB1 395 aa19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 KLBQ86Z14 1044 aa19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 ZHX1-C8orf76Q96EF9 292 aa19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 RERGLQ9H628 205 aa19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 ZNF703Q9H7S9 590 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-202ENST00000346495 ZNF670-ZNF695F2Z2N8 137 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 KLRC4-KLRK1H3BQV0 150 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 DNPH1O43598 174 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 SLC16A7O60669 478 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 LALBAP00709 142 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 HCCSP53701 268 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 ARG2P78540 354 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 RUNX1T1Q06455 604 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 DNM1P34Q6PK57 102 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 LYPD4Q6UWN0 246 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 USP43Q70EL4 1123 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 HDDC2Q7Z4H3 204 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 TIGD4Q8IY51 512 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 KBTBD8Q8NFY9 601 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 TXNDC15Q96J42 360 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 MNTQ99583 582 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 TSPAN10Q9H1Z9 355 aaPredicted RBP19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 MARCH7Q9H992 704 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 TRIM36Q9NQ86 728 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 MED29Q9NX70 200 aa19.21■□□□□ 0.67
TSPAN3-202ENST00000346495 FREM3P0C091 2139 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 A0A0J9YW62 118 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 DCDC2BA2VCK2 349 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 HPNP05981 417 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 SDHBP21912 280 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 CCL11P51671 97 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 BIDP55957 195 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 TAS2R43P59537 309 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 H3F3AP84243 136 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 SSX6Q7RTT6 188 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 SYS1Q8N2H4 156 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 C4orf36Q96KX1 117 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 KCNK17Q96T54 332 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 CENPOQ9BU64 300 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 SSR3Q9UNL2 185 aa19.2■□□□□ 0.66
TSPAN3-202ENST00000346495 DMXL1Q9Y485 3027 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 IGLV1-36A0A0B4J1U3 117 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 ZNF814B7Z6K7 855 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 J3QLW9 94 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 TNFSF11O14788 317 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 GPX5O75715 221 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 ZNF19P17023 458 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 ZNF43P17038 809 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 GABRA5P31644 462 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 CRYBB2P43320 205 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 RPS3AP61247 264 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 TUBA1BP68363 451 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 PLGLB1Q02325 96 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 GPR50Q13585 617 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 CDONQ4KMG0 1287 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 ESPNLQ6ZVH7 1005 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 TUBA1AQ71U36 451 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 VASH1Q7L8A9 365 aaPredicted RBP19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 GALNTL5Q7Z4T8 443 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 GPAT4Q86UL3 456 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 SNX33Q8WV41 574 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 SLC39A7Q92504 469 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 INTS14Q96SY0 518 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 TTTY12Q9BZ98 90 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 DCSTAMPQ9H295 470 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 EXOSC4Q9NPD3 245 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 COPS3Q9UNS2 423 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 SF3B6Q9Y3B4 125 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 KIAA1549Q9HCM3 1950 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 GVINP1Q7Z2Y8 2422 aa19.19■□□□□ 0.66
TSPAN3-202ENST00000346495 PNMA8CA0A1B0GUJ8 204 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 TVP23AA6NH52 213 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 TRAF3IP2O43734 574 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 VAMP5O95183 116 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 CTLA4P16410 223 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 MEOX1P50221 254 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 GFRA1P56159 465 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 RFLNBQ8N5W9 214 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 ZFP41Q8N8Y5 198 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 DYNC2LI1Q8TCX1 351 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 SCMH1Q96GD3 660 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 KLHL13Q9P2N7 655 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 KLK13Q9UKR3 277 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 ZMIZ1Q9ULJ6 1067 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 CENPBD1B2RD01 187 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 CELP19835 753 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 POU3F2P20265 443 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 TGFBR1P36897 503 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 PEX19P40855 299 aa19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 AGFG1P52594 562 aaKnown RBP19.18■□□□□ 0.66
TSPAN3-202ENST00000346495 OR12D2P58182 307 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms