RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 BLOC1S5-TXNDC5H3BN57 136 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 J3KTA2 159 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 FFAR1O14842 300 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 OR7A10O76100 309 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 IGF2P01344 180 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 HLA-HP01893 362 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 TSPAN19P0C672 248 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 THRBP10828 461 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 B4GALT1P15291 398 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 FUT1P19526 365 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 YAP1P46937 504 aaKnown RBP12.52□□□□□ -0.41
HMGN3-202ENST00000344726 CSNK1A1P48729 337 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 IDH3GP51553 393 aaPredicted RBP12.52□□□□□ -0.41
HMGN3-202ENST00000344726 RPL18Q07020 188 aaKnown RBP12.52□□□□□ -0.41
HMGN3-202ENST00000344726 CBLL1Q75N03 491 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 SGTBQ96EQ0 304 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 PRRC1Q96M27 445 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 ADAD1Q96M93 576 aaKnown RBP12.52□□□□□ -0.41
HMGN3-202ENST00000344726 HS6ST2Q96MM7 605 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF75AQ96N20 296 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 B3GAT2Q9NPZ5 323 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 MAN2C1Q9NTJ4 1040 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 GLTPQ9NZD2 209 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 ABCD2Q9UBJ2 740 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 ADAM21Q9UKJ8 722 aa12.52□□□□□ -0.41
HMGN3-202ENST00000344726 H7C417 338 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 LY6HO94772 140 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 CRYAAP02489 173 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 HIST1H2ABP04908 130 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 F13BP05160 661 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 PGA4P0DJD7 388 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 PGA3P0DJD8 388 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 NCK1P16333 377 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 PAX7P23759 505 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 AQP2P41181 271 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 CAPZA2P47755 286 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 PSME3P61289 254 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 HGFACQ04756 655 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 RUNX1T1Q06455 604 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 NPRL3Q12980 569 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 SWI5Q1ZZU3 235 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 LRFN4Q6PJG9 635 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF813Q6ZN06 617 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 HIST3H2AQ7L7L0 130 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 TSEN54Q7Z6J9 526 aaKnown RBP12.51□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF525Q8N782 197 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 RBM15BQ8NDT2 890 aaKnown RBP12.51□□□□□ -0.41
HMGN3-202ENST00000344726 MOSPD2Q8NHP6 518 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 FGFBP3Q8TAT2 258 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 LIPHQ8WWY8 451 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 HIST1H2ACQ93077 130 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 SLC25A44Q96H78 314 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-202ENST00000344726 FOXB1Q99853 325 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 CA10Q9NS85 328 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 RHCGQ9UBD6 479 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 POFUT2Q9Y2G5 429 aa12.51□□□□□ -0.41
HMGN3-202ENST00000344726 IGHV2OR16-5A0A0B4J2B6 119 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 GMNCA6NCL1 334 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 KIAA1324LA8MWY0 1029 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-202ENST00000344726 GSTA4O15217 222 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 GPRIN2O60269 458 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 PRSS23O95084 383 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF682O95780 498 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 SERPINA1P01009 418 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 PRDX6P30041 224 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 ARR3P36575 388 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 NUDT6P53370 316 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 PIGFQ07326 219 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 ST3GAL3Q11203 375 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 ADIPOQQ15848 244 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 MEX3DQ86XN8 651 aaKnown RBP12.5□□□□□ -0.41
HMGN3-202ENST00000344726 OFCC1Q8IZS5 231 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 OR10H5Q8NGA6 315 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 LZICQ8WZA0 190 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF566Q969W8 418 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 CMTM5Q96DZ9 223 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 FBXO17Q96EF6 278 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 HSH2DQ96JZ2 352 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 KCTD14Q9BQ13 255 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-202ENST00000344726 KCNS3Q9BQ31 491 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 BARX1Q9HBU1 254 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-202ENST00000344726 MED31Q9Y3C7 131 aa12.5□□□□□ -0.41
HMGN3-202ENST00000344726 SVEP1Q4LDE5 3571 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 C3orf80F5H4A9 247 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 GPR37O15354 613 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 BCL10O95999 233 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 IFNW1P05000 195 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 PATE4P0C8F1 98 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 CD79AP11912 226 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 ZNF14P17017 642 aaPredicted RBP12.49□□□□□ -0.41
HMGN3-202ENST00000344726 MAKP20794 623 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 GNGT1P63211 74 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 MYBPC1Q00872 1141 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 HIST3H3Q16695 136 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 GSG1Q2KHT4 349 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 IFI44LQ53G44 452 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 VHLLQ6RSH7 139 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 CPLX4Q7Z7G2 160 aa12.49□□□□□ -0.41
HMGN3-202ENST00000344726 SKA3Q8IX90 412 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms