RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 EIF2S3P41091 472 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 MLLT11Q13015 90 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 EIF4EBP2Q13542 120 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 GNMTQ14749 295 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 SCNM1Q9BWG6 230 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 DOK2O60496 412 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 CEACAM1P13688 526 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 HTR1FP30939 366 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 PGBD2Q6P3X8 592 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 C16orf47Q6ZP98 133 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 CMTM1Q8IZ96 169 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 BEST3Q8N1M1 668 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 OR2V1Q8NHB1 315 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 SLC7A13Q8TCU3 470 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 STK35Q8TDR2 534 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 LRFN5Q96NI6 719 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 GNRHR2Q96P88 292 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 SPTBN1Q01082 2364 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 MSR1P21757 451 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 AGFG1P52594 562 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 PLGLAQ15195 96 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 MPEG1Q2M385 716 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 GLB1L2Q8IW92 636 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 CENPOQ9BU64 300 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 EMC6Q9BV81 110 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 NEU3Q9UQ49 428 aa14.97□□□□□ -0.01
SMARCA4-201ENST00000344626 SERTM1A2A2V5 107 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 PIP5K1CO60331 668 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 TP53P04637 393 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 OR8G3PP0DMU2 310 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 LIPCP11150 499 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 TBXA2RP21731 343 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 IDH3GP51553 393 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 DPY19L4Q7Z388 723 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 ZNF709Q8N972 641 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 SPERTQ8NA61 448 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 PFN4Q8NHR9 129 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 NKX2-8O15522 239 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 GREM1O60565 184 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 HPP00738 406 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 CRYAAP02489 173 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 UBCP0CG48 685 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 PSMA6P60900 246 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 SNTB2Q13425 540 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 CMPK2Q5EBM0 449 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 GCNT2Q8N0V5 402 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 NUDT8Q8WV74 236 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 GGHQ92820 318 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 RRNAD1Q96FB5 475 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 OR11A1Q9GZK7 315 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 UBQLN3Q9H347 655 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 MED20Q9H944 212 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 KCNN3Q9UGI6 736 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 PLXNA1Q9UIW2 1896 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 hCG_1809904A0A1W2PP81 198 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 A0A1W2PPE2 198 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 A0A1W2PR64 198 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 A0A1W2PRV1 198 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 RELAQ04206 551 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 THEM4Q5T1C6 240 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 RNF165Q6ZSG1 346 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 SH2D5Q6ZV89 423 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 FCRLAQ7L513 359 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 ZNF554Q86TJ5 538 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 CPNE4Q96A23 557 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 TIMM10BQ9Y5J6 103 aa14.96□□□□□ -0.01
SMARCA4-201ENST00000344626 SGCEO43556 437 aa14.96□□□□□ -0.02
SMARCA4-201ENST00000344626 FCMRO60667 390 aa14.96□□□□□ -0.02
SMARCA4-201ENST00000344626 SOX8P57073 446 aa14.96□□□□□ -0.02
SMARCA4-201ENST00000344626 FGFBP1Q14512 234 aa14.96□□□□□ -0.02
SMARCA4-201ENST00000344626 SYT14P1Q58G82 188 aa14.96□□□□□ -0.02
SMARCA4-201ENST00000344626 ZNF582Q96NG8 517 aaPredicted RBP14.96□□□□□ -0.02
SMARCA4-201ENST00000344626 GREB1LQ9C091 1923 aaPredicted RBP14.96□□□□□ -0.02
SMARCA4-201ENST00000344626 SIMC1Q8NDZ2 872 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 PSMF1Q92530 271 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 TFPTP0C1Z6 253 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 MRPS10P82664 201 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 TBCEQ15813 527 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 SLC22A6Q4U2R8 563 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 NKAIN4Q8IVV8 208 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 CCDC120Q96HB5 630 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 HRASLS5Q96KN8 279 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 GALNT9Q9HCQ5 603 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 C14orf119Q9NWQ9 140 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 MYOTQ9UBF9 498 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 GABRR1P24046 479 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 CHRNB4P30926 498 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 MTCP1P56278 107 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 SPINK14Q6IE38 97 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 COQ8AQ8NI60 647 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 TIMD4Q96H15 378 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 SLC25A18Q9H1K4 315 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 FBXL3Q9UKT7 428 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 NKX6-3A6NJ46 265 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 GAPDHSO14556 408 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 GP1BAP07359 652 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 ERVK-16P61578 105 aa14.95□□□□□ -0.02
SMARCA4-201ENST00000344626 SLC16A9Q7RTY1 509 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms