RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TGOLN2O43493 480 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SOCS5O75159 536 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 RCBTB2O95199 551 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 PET100P0DJ07 73 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 MYOGP15173 224 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 CD1CP29017 333 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 RABIFP47224 123 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 GSK3AP49840 483 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 OR2B8PP59922 312 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 RHOAP61586 193 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 HNRNPKP61978 463 aaKnown RBP eCLIP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 RPS26P62854 115 aaKnown RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SRSF3P84103 164 aaKnown RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ZNF85Q03923 595 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SKP2Q13309 424 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ZNF177Q13360 481 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 GRB14Q14449 540 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ELAVL1Q15717 326 aaKnown RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 UPP1Q16831 310 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 C10orf120Q5SQS8 335 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 STEAP1BQ6NZ63 245 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 FAHD2BQ6P2I3 314 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TMEM205Q6UW68 189 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 LCTLQ6UWM7 567 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 MAMDC2Q7Z304 686 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TGIF2LXQ8IUE1 241 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 UBAC2Q8NBM4 344 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 OR51S1Q8NGJ8 323 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 OR13D1Q8NGV5 346 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 OR56A3Q8NH54 315 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TERB2Q8NHR7 220 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 RAB8BQ92930 207 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 GCDHQ92947 438 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 KISS1RQ969F8 398 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SLC25A36Q96CQ1 311 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 FAHD2AQ96GK7 314 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SMIM14Q96QK8 99 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 CDCA3Q99618 268 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 PHB2Q99623 299 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 CNTNAP3Q9BZ76 1288 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 OR52A5Q9H2C5 316 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SEMA6CQ9H3T2 930 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SLC17A5Q9NRA2 495 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 CMC2Q9NRP2 79 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TDP1Q9NUW8 608 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 PISDQ9UG56 409 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 FLVCR1Q9Y5Y0 555 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ZFHX2Q9C0A1 2572 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TRBV6-7A0A0A0MS04 114 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 TRBV2A0A0J9YWF9 115 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 C7orf77A4D0Y5 90 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 ANTXRLA6NF34 631 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 OR2W5A6NFC9 320 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 OR52A4PA6NMU1 304 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 MARCH11A6NNE9 402 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 PROB1E7EW31 1015 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 RPL36A-HNRNPH2H7BZ11 118 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 PPP1R2P9O14990 202 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 PRAMEF12O95522 483 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 HEXBP07686 556 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 FGF7P21781 194 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 FRKP42685 505 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-201ENST00000343524 CRYBB1P53674 252 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-201ENST00000343524 OR12D2P58182 307 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 SIRPAP78324 504 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 HSD11B2P80365 405 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 SLC7A9P82251 487 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 MC1RQ01726 317 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 HGFACQ04756 655 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 SYPL1Q16563 259 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 NKAIN2Q5VXU1 208 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 ADAM5Q6NVV9 412 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 CLEC9AQ6UXN8 241 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 UNQ6126/PRO20091Q6UXV3 157 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 NPSR1Q6W5P4 371 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 ANKRD33Q7Z3H0 272 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 LRRTM1Q86UE6 522 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 TMEM173Q86WV6 379 aaPredicted RBP7.43□□□□□ -1.22
ATG4A-201ENST00000343524 TMEM229BQ8NBD8 167 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 OR7G2Q8NG99 324 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 TMED6Q8WW62 240 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 ZBTB8AQ96BR9 441 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 MOAP1Q96BY2 351 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 TCTN2Q96GX1 697 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 SAMD8Q96LT4 415 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 OR14A2Q96R54 314 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 PIGQQ9BRB3 760 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 NDUFAF3Q9BU61 184 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 ACTRT3Q9BYD9 372 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 GPR62Q9BZJ7 368 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 TGIF2Q9GZN2 237 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 ADGRL4Q9HBW9 690 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 OR5V1Q9UGF6 321 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 ADAM18Q9Y3Q7 739 aa7.43□□□□□ -1.22
ATG4A-201ENST00000343524 MBLAC1A4D2B0 266 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-201ENST00000343524 FAM183AA6NL82 134 aa7.42□□□□□ -1.22
ATG4A-201ENST00000343524 M0R036 132 aa7.42□□□□□ -1.22
ATG4A-201ENST00000343524 OR10H2O60403 315 aa7.42□□□□□ -1.22
ATG4A-201ENST00000343524 FGF19O95750 216 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms