RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 hCG_1807616A0A1W2PRN6 198 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 RP2O75695 350 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 AKR7A3O95154 331 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 CD3DP04234 171 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 SPARCP09486 303 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 KIR2DL1P43626 348 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-201ENST00000340437 ARHGAP40Q5TG30 622 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 CFAP77Q6ZQR2 320 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 ZNF321PQ8N8H1 164 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 KTI12Q96EK9 354 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-201ENST00000340437 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 SFXN1Q9H9B4 322 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 PFDN2Q9UHV9 154 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 KCNG2Q9UJ96 466 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 A0A087WUJ7 227 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 GPRIN2O60269 458 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 LPLP06858 475 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 IFNGR1P15260 489 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 MNDAP41218 407 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 MEP1BQ16820 701 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 ZNF227Q86WZ6 799 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 SEC22AQ96IW7 307 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 PTDSS2Q9BVG9 487 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 CFHR5Q9BXR6 569 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 GDE1Q9NZC3 331 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 FBXL3Q9UKT7 428 aa13.1□□□□□ -0.31
CPSF7-201ENST00000340437 ATXN7L1Q9ULK2 861 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-201ENST00000340437 A0A0J9YY10 115 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 A0A1B0GUH1 482 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 CDK2AP1O14519 115 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 GSTZ1O43708 216 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-201ENST00000340437 KCNJ13O60928 360 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 SDC3O75056 442 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 PLATP00750 562 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 IGF2P01344 180 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 RAB38P57729 211 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 HHEXQ03014 270 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 MFSD13AQ14CX5 517 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 TMUB2Q71RG4 321 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 MDGA2Q7Z553 956 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 OR6M1Q8NGM8 313 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 TRAF4Q9BUZ4 470 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-201ENST00000340437 OR10A5Q9H207 317 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 CGGBP1Q9UFW8 167 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-201ENST00000340437 ANKRD20A5PA0PJZ0 165 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 MCRIP1C9JLW8 97 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 PRAF2O60831 178 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 TGM6O95932 706 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 C4BPBP20851 252 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 POU3F4P49335 361 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 H2BFSP57053 126 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 SMAD2Q15796 467 aaKnown RBP13.09□□□□□ -0.31
CPSF7-201ENST00000340437 C1orf53Q5VUE5 145 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 OR7E24Q6IFN5 339 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 MCATQ8IVS2 390 aaKnown RBP13.09□□□□□ -0.31
CPSF7-201ENST00000340437 MUC20Q8N307 709 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-201ENST00000340437 HAVCR1Q96D42 359 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 B3GNT4Q9C0J1 378 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 NKX2-4Q9H2Z4 354 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 MOKQ9UQ07 419 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 TEX51A0A1B0GUA7 166 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 CCSO14618 274 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 HCRTR2O43614 444 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 SUSD5O60279 629 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 DEFA5Q01523 94 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 HLXQ14774 488 aaPredicted RBP13.09□□□□□ -0.31
CPSF7-201ENST00000340437 ELP2Q6IA86 826 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 PDCD10Q9BUL8 212 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 ELOVL3Q9HB03 270 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 PTTG3PQ9NZH4 202 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 FBXO4Q9UKT5 387 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 GPR179Q6PRD1 2367 aa13.09□□□□□ -0.31
CPSF7-201ENST00000340437 CLDN4O14493 209 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 EIF1AYO14602 144 aaKnown RBP13.08□□□□□ -0.32
CPSF7-201ENST00000340437 PPM1BO75688 479 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 RBM34P42696 430 aaKnown RBP13.08□□□□□ -0.32
CPSF7-201ENST00000340437 SEC61A1P61619 476 aaKnown RBP13.08□□□□□ -0.32
CPSF7-201ENST00000340437 RPL18Q07020 188 aaKnown RBP13.08□□□□□ -0.32
CPSF7-201ENST00000340437 TMEM205Q6UW68 189 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 JAGN1Q8N5M9 183 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 TAS2R5Q9NYW4 299 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 ABCA7Q8IZY2 2146 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 RNH1P13489 461 aaKnown RBP13.08□□□□□ -0.32
CPSF7-201ENST00000340437 HNRNPA2B1P22626 353 aaKnown RBP13.08□□□□□ -0.32
CPSF7-201ENST00000340437 TACR3P29371 465 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 S100A11P31949 105 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 MAP3K8P41279 467 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 PRSS42Q7Z5A4 293 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 STPG2Q8N412 459 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 MIB2Q96AX9 1013 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 LPAR4Q99677 370 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF230Q9UIE0 474 aaPredicted RBP13.08□□□□□ -0.32
CPSF7-201ENST00000340437 ICAM5Q9UMF0 924 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 SPTBN5Q9NRC6 3674 aaKnown RBP13.08□□□□□ -0.32
CPSF7-201ENST00000340437 A0A1W2PQF6 199 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 ATP6V1G2-DDX39BF2Z307 99 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 F5H5P2 479 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 CD14P08571 375 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 CT45A8P0DMV1 189 aa13.08□□□□□ -0.32
CPSF7-201ENST00000340437 CT45A9P0DMV2 189 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms