RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SDHAP31040 664 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 KIR2DL3P43628 341 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 ROR2Q01974 943 aaKnown RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 FAHD1Q6P587 224 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 THSD4Q6ZMP0 1018 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 MEX3BQ6ZN04 569 aaKnown RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF620Q6ZNG0 422 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 BHLHA15Q7RTS1 189 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 PQLC1Q8N2U9 271 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF433Q8N7K0 673 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 Q96M85 177 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF570Q96NI8 536 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 TSPAN32Q96QS1 320 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 NIPSNAP1Q9BPW8 284 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 SPOCK3Q9BQ16 436 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 ALG12Q9BV10 488 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 TSSK6Q9BXA6 273 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 TEX12Q9BXU0 123 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 MRPL13Q9BYD1 178 aaKnown RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 ULBP2Q9BZM5 246 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 EGLN3Q9H6Z9 239 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 CRLF2Q9HC73 371 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 GPR35Q9HC97 309 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 NPDC1Q9NQX5 325 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 PAPOLBQ9NRJ5 636 aaKnown RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 TBC1D23Q9NUY8 699 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 PLEKHB1Q9UF11 243 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 IL20RAQ9UHF4 553 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 BAIAP2Q9UQB8 552 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 MAGED1Q9Y5V3 778 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 DOCK7Q96N67 2140 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 ARHGAP21Q5T5U3 1957 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 C19orf84I3L1E1 186 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 PDLIM1O00151 329 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 RRP9O43818 475 aaKnown RBP10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 LYZL6O75951 148 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 PPP1R3DO95685 299 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 TXNDC12O95881 172 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 QDPRP09417 244 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 PGA4P0DJD7 388 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 PGA3P0DJD8 388 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 CDH2P19022 906 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 POU1F1P28069 291 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 GRNP28799 593 aaKnown RBP10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 GUCA1AP43080 201 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 DAPP51397 102 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF84P51523 738 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 SH3BGRP55822 239 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 FXYD6P3P58550 94 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 ELF3P78545 371 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 LGALS3BPQ08380 585 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 STK11Q15831 433 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 CLEC12AQ5QGZ9 265 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 THEM4Q5T1C6 240 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 ANKRD34AQ69YU3 496 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 LRFN4Q6PJG9 635 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 KLHL17Q6TDP4 642 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 SSX8Q7RTT4 187 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 P2RY8Q86VZ1 359 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 DMRTC2Q8IXT2 367 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 SYT14Q8NB59 555 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 OR2T33Q8NG76 320 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 TEX47Q8TBZ9 253 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 MAGEE2Q8TD90 523 aaPredicted RBP10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 HSD17B8Q92506 261 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 MUCL1Q96DR8 90 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 MUS81Q96NY9 551 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 RBM4BQ9BQ04 359 aaKnown RBP10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 RBM4Q9BWF3 364 aaKnown RBP10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 GABARAPL1Q9H0R8 117 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 SMURF2Q9HAU4 748 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 REV1Q9UBZ9 1251 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 ENOPH1Q9UHY7 261 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 OAZ3Q9UMX2 235 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 ADAM18Q9Y3Q7 739 aa10.49□□□□□ -0.73
SPTLC1-202ENST00000337841 FASNP49327 2511 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 NCOA6Q14686 2063 aaPredicted RBP10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 MED12LQ86YW9 2145 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 HELZ2Q9BYK8 2649 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 TEX13CA0A0J9YWL9 993 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 SOCS2O14508 198 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 DHHO43323 396 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 SOX14O95416 240 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 RENP00797 406 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 HMGN1P05114 100 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 ITGA5P08648 1049 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 COX6B1P14854 86 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 ANPEPP15144 967 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 COX5AP20674 150 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 GIPRP48546 466 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 ESRRGP62508 458 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 ARF1P84077 181 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 MYBPC1Q00872 1141 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 RUNX1T1Q06455 604 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 CD47Q08722 323 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 KRR1Q13601 381 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 TSC22D1Q15714 1073 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 GABRA6Q16445 453 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 HIST3H3Q16695 136 aa10.48□□□□□ -0.73
SPTLC1-202ENST00000337841 CEACAM16Q2WEN9 425 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms