RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SELENOVP59797 346 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 RPS23P62266 143 aaKnown RBP9.21□□□□□ -0.94
CAPN3-202ENST00000337571 DUSP7Q16829 419 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 ENTPD8Q5MY95 495 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 INTS11Q5TA45 600 aaKnown RBP9.21□□□□□ -0.94
CAPN3-202ENST00000337571 LIPNQ5VXI9 398 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 REP15Q6BDI9 236 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 DLEU7Q6UYE1 221 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 PIWIL3Q7Z3Z3 882 aaKnown RBP9.21□□□□□ -0.94
CAPN3-202ENST00000337571 DHDDSQ86SQ9 333 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 MYPOPQ86VE0 399 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-202ENST00000337571 COMTD1Q86VU5 262 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 OR5J2Q8NH18 312 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 RASSF5Q8WWW0 418 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 RSPO3Q9BXY4 272 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-202ENST00000337571 IKZF5Q9H5V7 419 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 SLC52A3Q9NQ40 469 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 NANSQ9NR45 359 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 FAM53CQ9NYF3 392 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 REV1Q9UBZ9 1251 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 FBN3Q75N90 2809 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 TMEM129A0AVI4 362 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 LRP5LA4QPB2 252 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF503-AS2A6NEH8 195 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 CPSF4LA6NMK7 179 aaKnown RBP9.2□□□□□ -0.94
CAPN3-202ENST00000337571 LRRN3E7EW58 273 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 M0R233 179 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 M0R3H8 397 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 TPST2O60704 377 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 FARS2O95363 451 aaKnown RBP9.2□□□□□ -0.94
CAPN3-202ENST00000337571 CH25HO95992 272 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 OR8G3PP0DMU2 310 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 UMPSP11172 480 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 B4GALT1P15291 398 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 CD247P20963 164 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 IGFBP5P24593 272 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 GLRXP35754 106 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 SRP14P37108 136 aaKnown RBP9.2□□□□□ -0.94
CAPN3-202ENST00000337571 GIPRP48546 466 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 NFYCQ13952 458 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 LINC00114Q6XXX2 140 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 IL17RELQ6ZVW7 336 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 SLC35D2Q76EJ3 337 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF627Q7L945 461 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 PATL1Q86TB9 770 aaKnown RBP9.2□□□□□ -0.94
CAPN3-202ENST00000337571 CDK20Q8IZL9 346 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 LINC01356Q8N9X3 169 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 VANGL1Q8TAA9 524 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF566Q969W8 418 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 MRPL24Q96A35 216 aaKnown RBP9.2□□□□□ -0.94
CAPN3-202ENST00000337571 SNX18Q96RF0 628 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 ARHGDIGQ99819 225 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 FOXB1Q99853 325 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 CPPED1Q9BRF8 314 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-202ENST00000337571 TPK1Q9H3S4 243 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 RNF121Q9H920 327 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 GLTPQ9NZD2 209 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 DUSP13Q9UII6 198 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 GPR160Q9UJ42 338 aa9.2□□□□□ -0.94
CAPN3-202ENST00000337571 A0A1W2PPW3 197 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 SLC22A23A1A5C7 686 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 TRAPPC13A5PLN9 417 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 HMGB1P1B2RPK0 211 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-202ENST00000337571 KPNA4O00629 521 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-202ENST00000337571 PTHP01270 115 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF35P13682 527 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF14P17017 642 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-202ENST00000337571 PCMT1P22061 227 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 PCBP3P57721 371 aaKnown RBP9.19□□□□□ -0.94
CAPN3-202ENST00000337571 MTPNP58546 118 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 ZP4Q12836 540 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 CR1LQ2VPA4 569 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 TMEM53Q6P2H8 277 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 PTOV1Q86YD1 416 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 SKA3Q8IX90 412 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 SLC22A24Q8N4F4 322 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 DPP10Q8N608 796 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 OR6T1Q8NGN1 323 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 OR6X1Q8NH79 312 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 ADAMTS16Q8TE57 1224 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 TSPEARQ8WU66 669 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 THOC1Q96FV9 657 aaKnown RBP9.19□□□□□ -0.94
CAPN3-202ENST00000337571 SLC25A44Q96H78 314 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-202ENST00000337571 MPP4Q96JB8 637 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 MAGEB18Q96M61 343 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 CGREF1Q99674 301 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 SH3GL1Q99961 368 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 SYT3Q9BQG1 590 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 WFDC6Q9BQY6 131 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 SLC19A3Q9BZV2 496 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 LRMDAQ9H2I8 198 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 GMPR2Q9P2T1 348 aaKnown RBP9.19□□□□□ -0.94
CAPN3-202ENST00000337571 SLC7A8Q9UHI5 535 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 TMEFF2Q9UIK5 374 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF346Q9UL40 294 aaKnown RBP9.19□□□□□ -0.94
CAPN3-202ENST00000337571 SLC7A7Q9UM01 511 aa9.19□□□□□ -0.94
CAPN3-202ENST00000337571 LYNX1G3V0Z9 82 aa9.18□□□□□ -0.94
CAPN3-202ENST00000337571 BLOC1S5-TXNDC5H3BN57 136 aa9.18□□□□□ -0.94
CAPN3-202ENST00000337571 LILRA1O75019 489 aa9.18□□□□□ -0.94
CAPN3-202ENST00000337571 BCL10O95999 233 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms