RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 DYRK2Q92630 601 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 TANKQ92844 425 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 KHSRPQ92945 711 aaKnown RBP eCLIP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SLC35B4Q969S0 331 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 TRABD2BA6NFA1 517 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 HBQ1P09105 142 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SFTA3P0C7M3 94 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SRMP19623 302 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 CCR7P32248 378 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 GATMP50440 423 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SIRPAP78324 504 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 PIN1Q13526 163 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 PDE7AQ13946 482 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 OR4D1Q15615 310 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SLC10A6Q3KNW5 377 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 PIP5KL1Q5T9C9 394 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF787Q6DD87 383 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 C5orf46Q6UWT4 87 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 RNF113BQ8IZP6 322 aaKnown RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 CD200R1Q8TD46 325 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 MRGPRX2Q96LB1 330 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 FYTTD1Q96QD9 318 aaKnown RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ATG101Q9BSB4 218 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 GSX1Q9H4S2 264 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ELOVL3Q9HB03 270 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 GPR173Q9NS66 373 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 A0A087X0M5 115 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 A0A0A6YYJ9 748 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 A0A1B0GX30 115 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 CFIP05156 583 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 GLB1P16278 677 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 RPL24P83731 157 aaKnown RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 FUT2Q10981 343 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SLC5A12Q1EHB4 618 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 CLEC1AQ8NC01 280 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 TIMM29Q9BSF4 260 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 CYB5R1Q9UHQ9 305 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 DIMT1Q9UNQ2 313 aaKnown RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 NALCNQ8IZF0 1738 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 CREBBPQ92793 2442 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 hCG_1809904A0A1W2PP81 198 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 A0A1W2PPE2 198 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 A0A1W2PR64 198 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 A0A1W2PRV1 198 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ST8SIA3O43173 380 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 FBP1P09467 338 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 FUT1P19526 365 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 TRA2BP62995 288 aaKnown RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 OLIG2Q13516 323 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 NSDHLQ15738 373 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 NCR3LG1Q68D85 454 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 MFSD9Q8NBP5 474 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SUSD3Q96L08 255 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SYT17Q9BSW7 474 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 KCTD3Q9Y597 815 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 G3V2L1 256 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 FGF4P08620 206 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 GM2AP17900 193 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 NNATQ16517 81 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ROBO1Q9Y6N7 1651 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 NWD2Q9ULI1 1742 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 A0A1B0GUH1 482 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 GPR25O00155 361 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 CNMDO75829 334 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 JUNBP17275 347 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ENPP1P22413 925 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 NPY4RP50391 375 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 IKZF1Q13422 519 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF718Q3SXZ3 478 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 EOGTQ5NDL2 527 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 TMEM201Q5SNT2 666 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 AGBL4Q5VU57 503 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 TMEM123Q8N131 208 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 LMNTD1Q8N9Z9 388 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 TMEM104Q8NE00 496 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 IGSF5Q9NSI5 407 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 MCTS1Q9ULC4 181 aaKnown RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 LHX6Q9UPM6 363 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 NRP1O14786 923 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 CD79AP11912 226 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ELOCQ15369 112 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 Q6ZTK2 550 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 FA2HQ7L5A8 372 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 HMGN2P46Q86SG4 172 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 DIO2Q92813 273 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 PHYHIPLQ96FC7 376 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 FBXL18Q96ME1 805 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 NSG2Q9Y328 171 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF814B7Z6K7 855 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 M0R2Z0 102 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 GPR31O00270 319 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 RRP8O43159 456 aaKnown RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 BCL2L11O43521 198 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 POU3F3P20264 500 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 PSMB6P28072 239 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 TMEM182Q6ZP80 229 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF547Q8IVP9 402 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 FIBINQ8TAL6 211 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 TRIB1Q96RU8 372 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 CTRCQ99895 268 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms