RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ZNF169Q14929 603 aaPredicted RBP21.48■■□□□ 1.03
TSKU-201ENST00000333090 ZFYVE21Q9BQ24 234 aa21.48■■□□□ 1.03
TSKU-201ENST00000333090 MPDZO75970 2070 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 SMAD9O15198 467 aaKnown RBP21.47■■□□□ 1.03
TSKU-201ENST00000333090 MST1P26927 711 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 PGDP52209 483 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 KIR2DS3Q14952 304 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 TMEM240Q5SV17 173 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 RNF44Q7L0R7 432 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 ZNF784Q8NCA9 323 aaPredicted RBP21.47■■□□□ 1.03
TSKU-201ENST00000333090 OR10Z1Q8NGY1 313 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 FAM3CQ92520 227 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 LRRC46Q96FV0 321 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 NKX3-1Q99801 234 aaPredicted RBP21.47■■□□□ 1.03
TSKU-201ENST00000333090 PBX4Q9BYU1 374 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 STARD5Q9NSY2 213 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 H7C1C5 153 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 DNASE2O00115 360 aaPredicted RBP21.47■■□□□ 1.03
TSKU-201ENST00000333090 DCTN6O00399 190 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 CSTAP01040 98 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 PRPS1P60891 318 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 LCN6P62502 163 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 SRSF5Q13243 272 aaKnown RBP21.47■■□□□ 1.03
TSKU-201ENST00000333090 MPPED2Q15777 294 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 HYAL4Q2M3T9 481 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 ELP2Q6IA86 826 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 ZNF546Q86UE3 836 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 ZNF417Q8TAU3 575 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 ST8SIA2Q92186 375 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 ANKRD9Q96BM1 317 aaPredicted RBP21.47■■□□□ 1.03
TSKU-201ENST00000333090 ASB16Q96NS5 453 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 POFUT1Q9H488 388 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 DTX4Q9Y2E6 619 aa21.47■■□□□ 1.03
TSKU-201ENST00000333090 RFPL4AA6NLU0 287 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 RFPL4AL1F8VTS6 287 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 ABHD16AO95870 558 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 ADH1BP00325 375 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 POU3F4P49335 361 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 LSM14AQ8ND56 463 aaKnown RBP21.46■■□□□ 1.03
TSKU-201ENST00000333090 COMMD4Q9H0A8 199 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 SLC25A32Q9H2D1 315 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 TAS2R3Q9NYW6 316 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 ZNF230Q9UIE0 474 aaPredicted RBP21.46■■□□□ 1.03
TSKU-201ENST00000333090 LAMP5Q9UJQ1 280 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 TBC1D3IA0A087WXS9 549 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 FAM74A7A6NL05 159 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 HRKO00198 91 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 CSRP1P21291 193 aaKnown RBP21.46■■□□□ 1.03
TSKU-201ENST00000333090 ACTR1BP42025 376 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 ACTR1AP61163 376 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 RPS4XP62701 263 aaKnown RBP21.46■■□□□ 1.03
TSKU-201ENST00000333090 FAM74A3Q4VXF1 159 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 NKAIN2Q5VXU1 208 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 TMED4Q7Z7H5 227 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 BIVMQ86UB2 503 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 CA13Q8N1Q1 262 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 OR2G2Q8NGZ5 317 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 CEP290O15078 2479 aa21.46■■□□□ 1.03
TSKU-201ENST00000333090 POM121BA6NF01 834 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 OR4C45A6NMZ5 311 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 NDUFA2O43678 99 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 CSF2RBP32927 897 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 PRSS3P35030 304 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 ADPRHP54922 357 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 GRM7Q14831 915 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 STEAP1BQ6NZ63 245 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 ENPP7Q6UWV6 458 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 SDR16C5Q8N3Y7 309 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 CLRN3Q8NCR9 226 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 OR6N2Q8NGY6 317 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 NARS2Q96I59 477 aaKnown RBP21.45■■□□□ 1.02
TSKU-201ENST00000333090 NPAS1Q99742 590 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 SLC6A17Q9H1V8 727 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 SLC6A15Q9H2J7 730 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 TRAV14DV4A0A0A6YYC5 116 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 TNFSF14O43557 240 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 F13BP05160 661 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 GJA4P35212 333 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 RCBTB1Q8NDN9 531 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 GPR148Q8TDV2 347 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 OR1E3Q8WZA6 343 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 C3orf49Q96BT1 292 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 ACTR10Q9NZ32 417 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 LRIT1Q9P2V4 623 aa21.45■■□□□ 1.02
TSKU-201ENST00000333090 TBC1D3DA0A087WVF3 549 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 A0A1B0GW55 424 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 TBC1D3LB9A6J9 549 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 TPPPO94811 219 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 TBC1D3HP0C7X1 549 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 DUX4L2P0CJ85 424 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 DUX4L3P0CJ86 424 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 DUX4L4P0CJ87 422 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 DUX4L5P0CJ88 424 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 DUX4L6P0CJ89 424 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 DUX4L7P0CJ90 424 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 GRK6P43250 576 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 EIF2B5Q13144 721 aaKnown RBP21.44■■□□□ 1.02
TSKU-201ENST00000333090 ENPP2Q13822 863 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 ISXQ2M1V0 245 aa21.44■■□□□ 1.02
TSKU-201ENST00000333090 TBC1D3CQ6IPX1 549 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms