RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 EDF1O60869 148 aaKnown RBP10.63□□□□□ -0.71
TPM3-204ENST00000323144 NCR1O76036 304 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 RAB36O95755 333 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 CH25HO95992 272 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 MT-ATP6P00846 226 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 NR4A1P22736 598 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 GIFP27352 417 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 APEX1P27695 318 aaKnown RBP10.63□□□□□ -0.71
TPM3-204ENST00000323144 RAB39AQ14964 217 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 RABL3Q5HYI8 236 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 SLC35D2Q76EJ3 337 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 PAQR4Q8N4S7 273 aaPredicted RBP10.63□□□□□ -0.71
TPM3-204ENST00000323144 NOXO1Q8NFA2 376 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 BHLHE22Q8NFJ8 381 aaPredicted RBP10.63□□□□□ -0.71
TPM3-204ENST00000323144 PFN4Q8NHR9 129 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 STON2Q8WXE9 905 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 TMEM158Q8WZ71 300 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 TMEM54Q969K7 222 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 ZNF426Q9BUY5 554 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 NARFLQ9H6Q4 476 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 KAT8Q9H7Z6 458 aaKnown RBP10.63□□□□□ -0.71
TPM3-204ENST00000323144 NDUFAF1Q9Y375 327 aa10.63□□□□□ -0.71
TPM3-204ENST00000323144 A0A0G2JND7 137 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 TRAPPC13A5PLN9 417 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 M0QX08 132 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 M0R233 179 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 SHOX2O60902 331 aaPredicted RBP10.62□□□□□ -0.71
TPM3-204ENST00000323144 LILRA1O75019 489 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 UBL3O95164 117 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 TACSTD2P09758 323 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 PGA4P0DJD7 388 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 PGA3P0DJD8 388 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 ZNF35P13682 527 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 TCN1P20061 433 aaPredicted RBP10.62□□□□□ -0.71
TPM3-204ENST00000323144 PAX7P23759 505 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 GZMMP51124 257 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 UGT2B15P54855 530 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 ERVS71-1P61550 626 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 RBBP4Q09028 425 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 SF3A3Q12874 501 aaKnown RBP eCLIP10.62□□□□□ -0.71
TPM3-204ENST00000323144 RIN1Q13671 783 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 FXNQ16595 210 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 CR1LQ2VPA4 569 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 TRMT5Q32P41 509 aaKnown RBP10.62□□□□□ -0.71
TPM3-204ENST00000323144 ALKBH6Q3KRA9 238 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 ELFN2Q5R3F8 820 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 NANOGNBQ7Z5D8 188 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 PXKQ7Z7A4 578 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 CARM1Q86X55 608 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 SKA3Q8IX90 412 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 OR10A6Q8NH74 314 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 NEU4Q8WWR8 484 aaPredicted RBP10.62□□□□□ -0.71
TPM3-204ENST00000323144 LRR1Q96L50 414 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 MAGEB18Q96M61 343 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 SH3GL3Q99963 347 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 PRSS27Q9BQR3 290 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 TMEM120AQ9BXJ8 343 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 OR51B6Q9H340 312 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 MEPEQ9NQ76 525 aaPredicted RBP10.62□□□□□ -0.71
TPM3-204ENST00000323144 TMEM38BQ9NVV0 291 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 TAS2R5Q9NYW4 299 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 CMAHPQ9Y471 501 aa10.62□□□□□ -0.71
TPM3-204ENST00000323144 ZNF726A6NNF4 738 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 HMGB1P1B2RPK0 211 aaPredicted RBP10.61□□□□□ -0.71
TPM3-204ENST00000323144 RNF13O43567 381 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 PIP5K1CO60331 668 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 TGFAP01135 160 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 HPXP02790 462 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 UMPSP11172 480 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 CCL2P13500 99 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 CHN2P52757 468 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 SEC24CP53992 1094 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 MYBPC1Q00872 1141 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 RUNX1T1Q06455 604 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 VMACQ2NL98 169 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 TTC33Q6PID6 262 aaPredicted RBP10.61□□□□□ -0.71
TPM3-204ENST00000323144 RINLQ6ZS11 566 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 PATL1Q86TB9 770 aaKnown RBP10.61□□□□□ -0.71
TPM3-204ENST00000323144 CCDC36Q8IYA8 594 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 ZNF786Q8N393 782 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 OR6X1Q8NH79 312 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 UBASH3BQ8TF42 649 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 TMEM255BQ8WV15 326 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 GTF3AQ92664 365 aaKnown RBP10.61□□□□□ -0.71
TPM3-204ENST00000323144 TSPAN32Q96QS1 320 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 C19orf24Q9BVV8 132 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 PCDHAC1Q9H158 963 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 RABEP2Q9H5N1 569 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 EVA1AQ9H8M9 152 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 NANSQ9NR45 359 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 GLTPQ9NZD2 209 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 ZNF229Q9UJW7 825 aa10.61□□□□□ -0.71
TPM3-204ENST00000323144 A0A1W2PPW3 197 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 WNT9BO14905 357 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 SYNGR3O43761 229 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 SASH3O75995 380 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 F13BP05160 661 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 C8BP07358 591 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 ERCC1P07992 297 aaPredicted RBP10.6□□□□□ -0.71
TPM3-204ENST00000323144 ASAH2BP0C7U1 165 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms