RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CXCL14O95715 111 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 CSF1P09603 554 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 APEHP13798 732 aaKnown RBP8.8□□□□□ -1
PTPRA-202ENST00000318266 DDX6P26196 483 aaKnown RBP eCLIP8.8□□□□□ -15e-18■■■□□ 16.2
PTPRA-202ENST00000318266 CSF2RBP32927 897 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 POU3F4P49335 361 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 DIO1P49895 249 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 ZIC1Q15915 447 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 Q499Y3 187 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 Q7L0L9 218 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 RHOUQ7L0Q8 258 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 ZNF761Q86XN6 746 aaPredicted RBP8.8□□□□□ -1
PTPRA-202ENST00000318266 GALNT16Q8N428 558 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 POMGNT2Q8NAT1 580 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 OR52E1Q8NGJ3 308 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 CASTOR1Q8WTX7 329 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 SFT2D1Q8WV19 159 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 C10orf90Q96M02 699 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 ATG5Q9H1Y0 275 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 CHRNA9Q9UGM1 479 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 STEAP1Q9UHE8 339 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 FAM96BQ9Y3D0 163 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 RANBP2P49792 3224 aaKnown RBP8.8□□□□□ -1
PTPRA-202ENST00000318266 XRCC3O43542 346 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 DOK2O60496 412 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 ALOX12BO75342 701 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 CTAG2O75638 210 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 GPANK1O95872 356 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 HLA-AP01891 365 aaKnown RBP8.8□□□□□ -1
PTPRA-202ENST00000318266 PRNPP04156 253 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 CALCBP10092 127 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 ZNF28P17035 718 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 PRSS3P35030 304 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 AQP2P41181 271 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 AKR1C3P42330 323 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 EMDP50402 254 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 SNRPEP62304 92 aaKnown RBP8.8□□□□□ -1
PTPRA-202ENST00000318266 CDK3Q00526 305 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 RBM39Q14498 530 aaKnown RBP8.8□□□□□ -1
PTPRA-202ENST00000318266 NR0B2Q15466 257 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 PAN3Q58A45 887 aaKnown RBP8.8□□□□□ -1
PTPRA-202ENST00000318266 ARHGAP40Q5TG30 622 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 GLT8D1Q68CQ7 371 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 LEG1Q6P5S2 330 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 PSRC1Q6PGN9 363 aaPredicted RBP8.8□□□□□ -1
PTPRA-202ENST00000318266 TMEM205Q6UW68 189 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 SLC39A5Q6ZMH5 540 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 CD163Q86VB7 1156 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 ZNF227Q86WZ6 799 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 SLC35F3Q8IY50 421 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 CCDC36Q8IYA8 594 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 SLC39A11Q8N1S5 342 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 C10orf53Q8N6V4 93 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 OR2L3Q8NG85 312 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 OR4K14Q8NGD5 310 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 C3orf49Q96BT1 292 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 ADAD1Q96M93 576 aaKnown RBP8.8□□□□□ -1
PTPRA-202ENST00000318266 CMTM3Q96MX0 182 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 ZNF350Q9GZX5 532 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 PIGMQ9H3S5 423 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 FRRS1LQ9P0K9 344 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 MKL2Q9ULH7 1088 aa8.8□□□□□ -1
PTPRA-202ENST00000318266 EEF1E1-BLOC1S5C9J1V9 151 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 PRRT4C9JH25 899 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 NDUFB2O95178 105 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 RAB3DO95716 219 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 CPMP14384 443 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 CAPZA2P47755 286 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 MECP2P51608 486 aaKnown RBP8.79□□□□□ -1
PTPRA-202ENST00000318266 PSMD4P55036 377 aaKnown RBP8.79□□□□□ -1
PTPRA-202ENST00000318266 POLR2GP62487 172 aaKnown RBP eCLIP8.79□□□□□ -1
PTPRA-202ENST00000318266 ILF3Q12906 894 aaKnown RBP eCLIP8.79□□□□□ -13e-10■■■□□ 15.1
PTPRA-202ENST00000318266 PDZK1IP1Q13113 114 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 FHL1Q13642 323 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 PRAMEF17Q5VTA0 474 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 NKAIN2Q5VXU1 208 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 KCTD9Q7L273 389 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 FAM220AQ7Z4H9 259 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 PLPP7Q8NBV4 271 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 OR4E2Q8NGC2 313 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 RXFP4Q8TDU9 374 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 NKD1Q969G9 470 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 MYADMQ96S97 322 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 DHCR7Q9UBM7 475 aaKnown RBP8.79□□□□□ -1
PTPRA-202ENST00000318266 GPN3Q9UHW5 284 aaPredicted RBP8.79□□□□□ -1
PTPRA-202ENST00000318266 TRBV23-1A0A0A0MS06 115 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 A0A0D9SG52 128 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 RNF222A6NCQ9 220 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 BCL2L11O43521 198 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 RD3LP0DJH9 198 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 CD34P28906 385 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 AVPR2P30518 371 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 HSD17B2P37059 387 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 RFC3P40938 356 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 DHRS2Q13268 280 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 GAS6Q14393 721 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 OR1M1Q8NGA1 313 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 OR4S1Q8NGB4 309 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 OR10R2Q8NGX6 335 aa8.79□□□□□ -1
PTPRA-202ENST00000318266 TSEN15Q8WW01 171 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms