RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 STT3BQ8TCJ2 826 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 GRHL3Q8TE85 626 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 TMEM239Q8WW34 195 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 LRRC46Q96FV0 321 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 KLHDC3Q9BQ90 382 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF559Q9BR84 538 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 G6PC3Q9BUM1 346 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 NKX6-2Q9C056 277 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-201ENST00000317677 TGIF2Q9GZN2 237 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 CYSLTR2Q9NS75 346 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-201ENST00000317677 SRPK3Q9UPE1 567 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 IGHV3-20A0A0C4DH32 117 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 SERINC4A6NH21 518 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 NTN3O00634 580 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-201ENST00000317677 SCRG1O75711 98 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 IL33O95760 270 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 GLAP06280 429 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 S100PP25815 95 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 IFNGR2P38484 337 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 RFC3P40938 356 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 STAT5AP42229 794 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 GPR143P51810 404 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 CD226Q15762 336 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 STPG1Q5TH74 334 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF613Q6PF04 617 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 KIRREL2Q6UWL6 708 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 CASP12Q6UXS9 341 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 PDZD9Q8IXQ8 264 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 PRR22Q8IZ63 422 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 FAM26EQ8N5C1 309 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 FAM71CQ8NEG0 241 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 OR8J1Q8NGP2 316 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF524Q96C55 264 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF426Q9BUY5 554 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 EDEM2Q9BV94 578 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 DPH1Q9BZG8 443 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 RTN4RQ9BZR6 473 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 RNF32Q9H0A6 362 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 ENKD1Q9H0I2 346 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 EVA1AQ9H8M9 152 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 MALT1Q9UDY8 824 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 IL20RAQ9UHF4 553 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 EDARQ9UNE0 448 aa11.87□□□□□ -0.51
CPNE1-201ENST00000317677 A0A1B0GW55 424 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 DCDC2BA2VCK2 349 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 CDC14CA4D256 554 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 PMS2P1A4D2B8 440 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 FRG2CA6NGY1 282 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 TLX2O43763 284 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-201ENST00000317677 DUX4L2P0CJ85 424 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 DUX4L3P0CJ86 424 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 DUX4L4P0CJ87 422 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 DUX4L5P0CJ88 424 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 DUX4L6P0CJ89 424 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 DUX4L7P0CJ90 424 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 GABRA5P31644 462 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 GDI2P50395 445 aaKnown RBP11.86□□□□□ -0.51
CPNE1-201ENST00000317677 GAS1P54826 345 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 ST3GAL2Q16842 350 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 NKAIN1Q4KMZ8 207 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 SYT14P1Q58G82 188 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 CLEC12AQ5QGZ9 265 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 SLC25A30Q5SVS4 291 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 HES5Q5TA89 166 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 SLC30A6Q6NXT4 461 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF454Q8N9F8 522 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 GATSQ8NAP1 163 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 SFT2D1Q8WV19 159 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 C7orf50Q9BRJ6 194 aaKnown RBP11.86□□□□□ -0.51
CPNE1-201ENST00000317677 TSSK6Q9BXA6 273 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 SEMA4CQ9C0C4 833 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 OR51M1Q9H341 326 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 AKIRIN1Q9H9L7 192 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-201ENST00000317677 DUX4Q9UBX2 424 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 RARRES3Q9UL19 164 aa11.86□□□□□ -0.51
CPNE1-201ENST00000317677 C17orf51A8MQB3 221 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 TBXA2RP21731 343 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 CAPZA2P47755 286 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 SMSP52788 366 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 PSMD4P55036 377 aaKnown RBP11.85□□□□□ -0.51
CPNE1-201ENST00000317677 ZP1P60852 638 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 TSPAN5P62079 268 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 CRTC2Q53ET0 693 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-201ENST00000317677 PHF19Q5T6S3 580 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 ELP2Q6IA86 826 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 LINC00114Q6XXX2 140 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 PGAP1Q75T13 922 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 BTN2A1Q7KYR7 527 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 ZNF441Q8N8Z8 693 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 EXPH5Q8NEV8 1989 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 OR1N1Q8NGS0 311 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 OR1S1Q8NH92 325 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 OR14A16Q8NHC5 309 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 ELP5Q8TE02 316 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 C1GALT1C1Q96EU7 318 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 SAMD8Q96LT4 415 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 PTDSS2Q9BVG9 487 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 TMEM27Q9HBJ8 222 aa11.85□□□□□ -0.51
CPNE1-201ENST00000317677 TMEM9BQ9NQ34 198 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms