RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 FCN2Q15485 313 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 ETFDHQ16134 617 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 DMKNQ6E0U4 476 aaPredicted RBP11.23□□□□□ -0.61
RNF4-201ENST00000314289 LRRC69Q6ZNQ3 347 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 C1orf210Q8IVY1 113 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 GPALPP1Q8IXQ4 340 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 DUSP18Q8NEJ0 188 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 NFAM1Q8NET5 270 aaPredicted RBP11.23□□□□□ -0.61
RNF4-201ENST00000314289 OR4M2Q8NGB6 313 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 OR2T27Q8NH04 317 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 LRRC20Q8TCA0 184 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 ARL5BQ96KC2 179 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 SPSB2Q99619 263 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 WDR77Q9BQA1 342 aaPredicted RBP11.23□□□□□ -0.61
RNF4-201ENST00000314289 NMNAT2Q9BZQ4 307 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 KCNN2Q9H2S1 579 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 ACOD1A6NK06 481 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 TMEM200CA6NKL6 621 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 TO15178 435 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 TRIM3O75382 744 aaPredicted RBP11.23□□□□□ -0.61
RNF4-201ENST00000314289 OR2J2O76002 312 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 HLA-DQA2P01906 255 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 TDGF1P13385 188 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 ELK1P19419 428 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 NANOS3P60323 173 aaKnown RBP11.23□□□□□ -0.61
RNF4-201ENST00000314289 ACTC1P68032 377 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 ACTA1P68133 377 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 SIRPAP78324 504 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 RNASE12Q5GAN4 147 aaKnown RBP11.23□□□□□ -0.61
RNF4-201ENST00000314289 DPY19L4Q7Z388 723 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 C9orf62Q8N4C0 152 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 OR6N2Q8NGY6 317 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 MARVELD1Q9BSK0 173 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 PTDSS2Q9BVG9 487 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 TSPAN10Q9H1Z9 355 aaPredicted RBP11.23□□□□□ -0.61
RNF4-201ENST00000314289 INPP5EQ9NRR6 644 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 TAS2R10Q9NYW0 307 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 KCNN3Q9UGI6 736 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 PCDHGB7Q9Y5F8 929 aa11.23□□□□□ -0.61
RNF4-201ENST00000314289 I3L521 148 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 SLC43A1O75387 559 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 FAM157BP0CG42 384 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 NAT1P18440 290 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 SLC6A8P48029 635 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 EVX1P49640 407 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 P2RX1P51575 399 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 SF3A2Q15428 464 aaKnown RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 SLC35D2Q76EJ3 337 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 OVCH1Q7RTY7 1134 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 SAMD12Q8N8I0 201 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 ZNF431Q8TF32 576 aaPredicted RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 TTC9Q92623 222 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 HYLS1Q96M11 299 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 SLC25A18Q9H1K4 315 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 RXFP3Q9NSD7 469 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 KLRF1Q9NZS2 232 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 EXTL2Q9UBQ6 330 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 POLHQ9Y253 713 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 GLCEO94923 617 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 AKR7A3O95154 331 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 BGLAPP02818 100 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 F8A1P23610 371 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 GBX2P52951 348 aaPredicted RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 BDH1Q02338 343 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 POU4F2Q12837 409 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 ESPNLQ6ZVH7 1005 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 WDR5BQ86VZ2 330 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 BPHLQ86WA6 291 aaPredicted RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 POMGNT2Q8NAT1 580 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 OR10G3Q8NGC4 313 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 DACT3Q96B18 629 aaPredicted RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 ZC3HAV1LQ96H79 300 aaKnown RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 ADAD1Q96M93 576 aaKnown RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 TGIF2Q9GZN2 237 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 MED28Q9H204 178 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 GLTPQ9NZD2 209 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 IKZF2Q9UKS7 526 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 MGAT4AQ9UM21 535 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 AK6Q9Y3D8 172 aaKnown RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 PRRC2CQ9Y520 2896 aaKnown RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 A0A0A6YYJ9 748 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 ADAM10O14672 748 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 TOX3O15405 576 aaPredicted RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 LANCL1O43813 399 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 RAD1O60671 282 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 HLA-DQB1P01920 261 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 CDK5R1Q15078 307 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 POU4F3Q15319 338 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 ACKR1Q16570 336 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 MEP1BQ16820 701 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 ZBTB37Q5TC79 503 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 KRT74Q7RTS7 529 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 ZNF417Q8TAU3 575 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 THEM6Q8WUY1 208 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 ZNF587Q96SQ5 575 aaPredicted RBP11.22□□□□□ -0.61
RNF4-201ENST00000314289 AMELYQ99218 206 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.22□□□□□ -0.61
RNF4-201ENST00000314289 LOC400499M0QZD8 3231 aa11.22□□□□□ -0.61
RNF4-201ENST00000314289 IGLV3-12A0A075B6K2 115 aa11.21□□□□□ -0.61
RNF4-201ENST00000314289 CIB4A0PJX0 185 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms