RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SDR9C7Q8NEX9 313 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 UCN3Q969E3 161 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 C11orf54Q9H0W9 315 aaPredicted RBP8.15□□□□□ -1.11
COL6A5-202ENST00000312481 A0A1B0GTW7 788 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 SULT2B1O00204 365 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 SLC10A3P09131 477 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 SNCAP37840 140 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 MAN2A2P49641 1150 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 ASCL1P50553 236 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 GPRIN1Q7Z2K8 1008 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 LKAAEAR1Q8TD35 194 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 PRR11Q96HE9 360 aaPredicted RBP8.15□□□□□ -1.11
COL6A5-202ENST00000312481 NSG1A0A0A6YYJ2 146 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 GASTP01350 101 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 IDH3GP51553 393 aaPredicted RBP8.14□□□□□ -1.11
COL6A5-202ENST00000312481 BPIFB2Q8N4F0 458 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM106AQ96A25 262 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SEH1LQ96EE3 360 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 MAP3K3Q99759 626 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 ASF1BQ9NVP2 202 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SNX11Q9Y5W9 270 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TRIOBPQ9H2D6 2365 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 IRF2P14316 349 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 AKR1C2P52895 323 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 FXYD6P3P58550 94 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TAF9Q16594 264 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 OR10K2Q6IF99 312 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 PLPP5Q8NEB5 264 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TBX5Q99593 518 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 ELOVL3Q9HB03 270 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 A6NLC8 198 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 NCR1O76036 304 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 CSNK1A1P48729 337 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 BTG2P78543 158 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SHHQ15465 462 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 LGALSLQ3ZCW2 172 aaPredicted RBP8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SLC36A2Q495M3 483 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 CLECL1Q8IZS7 167 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 OR51T1Q8NGJ9 327 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 GHSRQ92847 366 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 FAM3DQ96BQ1 224 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SUCNR1Q9BXA5 334 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 METTL9Q9H1A3 318 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF442Q9H7R0 627 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SERINC4A6NH21 518 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 BCKDHBP21953 392 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 GNRHRP30968 328 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SDHAP31040 664 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 UBXN2BQ14CS0 331 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 WDR20Q8TBZ3 569 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TXNDC17Q9BRA2 123 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 PIGQQ9BRB3 760 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 KATNB1Q9BVA0 655 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 ALX4Q9H161 411 aaPredicted RBP8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SOX17Q9H6I2 414 aaPredicted RBP8.14□□□□□ -1.11
COL6A5-202ENST00000312481 NGBQ9NPG2 151 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 ZDBF2Q9HCK1 2354 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 LRRK1Q38SD2 2015 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 ICMTO60725 284 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 CNOT4O95628 575 aaKnown RBP8.14□□□□□ -1.11
COL6A5-202ENST00000312481 PSMB6P28072 239 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 IDUAP35475 653 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 PFN3P60673 137 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TEX261Q6UWH6 196 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TMUB2Q71RG4 321 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SGK3Q96BR1 496 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 MOCOSQ96EN8 888 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 PAPOLGQ9BWT3 736 aaKnown RBP8.14□□□□□ -1.11
COL6A5-202ENST00000312481 U3KQ87 197 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 ANKRD34BA5PLL1 514 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TEAD2Q15562 447 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 MKXQ8IYA7 352 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 OR51A4Q8NGJ6 313 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 OR4K15Q8NH41 348 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 FAM110BQ8TC76 370 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 DCBLD2Q96PD2 775 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 MMP26Q9NRE1 261 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 hCG_1809904A0A1W2PP81 198 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 A0A1W2PPE2 198 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 A0A1W2PR64 198 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 A0A1W2PRV1 198 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SGCEO43556 437 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 ABHD17CQ6PCB6 329 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SLC35D2Q76EJ3 337 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM151AQ8N4L1 468 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 NT5CQ8TCD5 201 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 FBLIM1Q8WUP2 373 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TEX101Q9BY14 249 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 NKX6-2Q9C056 277 aaPredicted RBP8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SLC5A6Q9Y289 635 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 HDGFL3Q9Y3E1 203 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 CSNK1G3Q9Y6M4 447 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 SLC9B1P1A6NJY1 282 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TIMP1P01033 207 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 CTSLP07711 333 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF28P17035 718 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 FOXK2Q01167 660 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 MC1RQ01726 317 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 CAMK2BQ13554 666 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 ACOT6Q3I5F7 207 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms