RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 AADACP22760 399 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 RAB40BQ12829 278 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 CRMP1Q14194 572 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 DBX2Q6ZNG2 339 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 PGBD5Q8N414 524 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 OR2G3Q8NGZ4 309 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 SDHAF2Q9NX18 166 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 CLDN24A6NM45 220 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 GFRA2O00451 464 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 PROZP22891 400 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 ZNF280AP59817 542 aaPredicted RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 PRTGQ2VWP7 1150 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 GLYR1Q49A26 553 aaPredicted RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 LYSMD2Q8IV50 215 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 FAM122AQ96E09 287 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 ARV1Q9H2C2 271 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 SFXN1Q9H9B4 322 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 SPACA1Q9HBV2 294 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 HSPE1-MOB4S4R3N1 261 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 PDE4DIPQ5VU43 2346 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 TMEM265A0A087WTH1 108 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 A0A096LPE4 126 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 A0A1W2PPZ6 126 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 F6UZH7 168 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 LGI1O95970 557 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 GSTP1P09211 210 aaKnown RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 CYBAP13498 195 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 DMWDQ09019 674 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 DUSP7Q16829 419 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 CLEC9AQ6UXN8 241 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 NAA40Q86UY6 237 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 FAM219AQ8IW50 185 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.68□□□□□ -0.542e-30■■■■■ 65.1
USP38-201ENST00000307017 CLEC1AQ8NC01 280 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 YIPF5Q969M3 257 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 C1orf123Q9NWV4 160 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 FZR1Q9UM11 496 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 CD1CP29017 333 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 SLC22A25Q6T423 547 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 CADM3Q8N126 398 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 RPUSD4Q96CM3 377 aaKnown RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 MAGT1Q9H0U3 335 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 CXorf36Q9H7Y0 433 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 TRAV34A0A0B4J273 112 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 GPANK1O95872 356 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 GUSBP08236 651 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 ELK1P19419 428 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 TRIM23P36406 574 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 DUSP2Q05923 314 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 PDZK1IP1Q13113 114 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 RBMS2Q15434 407 aaKnown RBP11.67□□□□□ -0.54
USP38-201ENST00000307017 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 KLHDC9Q8NEP7 349 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 PRO1933Q9H354 126 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 RNF186Q9NXI6 227 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 GPR160Q9UJ42 338 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 KCNG2Q9UJ96 466 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 ZNF724A8MTY0 619 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 LRRTM1Q86UE6 522 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 NOSIPQ9Y314 301 aaKnown RBP11.67□□□□□ -0.54
USP38-201ENST00000307017 TMEM184BQ9Y519 407 aaPredicted RBP11.67□□□□□ -0.54
USP38-201ENST00000307017 LAMB4A4D0S4 1761 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 EGFP01133 1207 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 HRH2P25021 359 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 RABIFP47224 123 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 ZNF140P52738 457 aaPredicted RBP11.67□□□□□ -0.54
USP38-201ENST00000307017 MLLT11Q13015 90 aaPredicted RBP11.67□□□□□ -0.54
USP38-201ENST00000307017 ACTBL2Q562R1 376 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 ZNF684Q5T5D7 378 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 STEAP1BQ6NZ63 245 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 LANCL3Q6ZV70 420 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 CCDC74AQ96AQ1 378 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 METTL9Q9H1A3 318 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 CHST8Q9H2A9 424 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 SLCO5A1Q9H2Y9 848 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 DECR2Q9NUI1 292 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 H0YGG7 62 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 YIF1AO95070 293 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 TK1P04183 234 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 MFGE8Q08431 387 aaPredicted RBP11.67□□□□□ -0.54
USP38-201ENST00000307017 ARL16Q0P5N6 197 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 PHYHD1Q5SRE7 291 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 FRMPD2BQ6IN97 320 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 TRNP1Q6NT89 227 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 MKXQ8IYA7 352 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 ZNRF4Q8WWF5 429 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 NARFLQ9H6Q4 476 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 NXPH2O95156 264 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 IGHG1P01857 330 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 QDPRP09417 244 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 DGCR2P98153 550 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 CTU2Q2VPK5 515 aaKnown RBP11.67□□□□□ -0.54
USP38-201ENST00000307017 LSMEM2Q8N112 164 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 DEFB108BQ8NET1 73 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 ZFAND1Q8TCF1 268 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 TMPRSS13Q9BYE2 586 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 FOXQ1Q9C009 403 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 TAAR2Q9P1P5 351 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 HHLA2Q9UM44 414 aa11.67□□□□□ -0.54
USP38-201ENST00000307017 MYO9BQ13459 2157 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms