RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 SLC35E2P0CK97 266 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF74Q16587 644 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 PLCXD3Q63HM9 321 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 RBMS3Q6XE24 437 aaKnown RBP11.84□□□□□ -0.51
COL3A1-201ENST00000304636 SLC16A12Q6ZSM3 486 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 RDH10Q8IZV5 341 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 SYS1Q8N2H4 156 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 RASD2Q96D21 266 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 NIPSNAP3BQ9BS92 247 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 OR11A1Q9GZK7 315 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 TAF9BQ9HBM6 251 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 GALR3O60755 368 aaPredicted RBP11.84□□□□□ -0.51
COL3A1-201ENST00000304636 DBHP09172 617 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 FAM26DQ5JW98 314 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 CYHR1Q6ZMK1 362 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 OR4Q3Q8NH05 313 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 CPNE4Q96A23 557 aaPredicted RBP11.84□□□□□ -0.51
COL3A1-201ENST00000304636 OCSTAMPQ9BR26 566 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 NIT2Q9NQR4 276 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 GDE1Q9NZC3 331 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.84□□□□□ -0.51
COL3A1-201ENST00000304636 A0A1W2PPV4 95 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 TTLL8A6PVC2 850 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 FCGR2AP12318 317 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 CST5P28325 142 aaPredicted RBP11.84□□□□□ -0.51
COL3A1-201ENST00000304636 BLVRBP30043 206 aaPredicted RBP11.84□□□□□ -0.51
COL3A1-201ENST00000304636 PMPCAQ10713 525 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 PRR18Q8N4B5 295 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 BTF3L4Q96K17 158 aa11.84□□□□□ -0.51
COL3A1-201ENST00000304636 PPP1R2P9O14990 202 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 ZNF217O75362 1048 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 NSA2O95478 260 aaKnown RBP11.83□□□□□ -0.52
COL3A1-201ENST00000304636 ZNF93P35789 620 aaPredicted RBP11.83□□□□□ -0.52
COL3A1-201ENST00000304636 NDUFA6P56556 154 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 ARHGAP11BQ3KRB8 267 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 SIGIRRQ6IA17 410 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 CDH26Q8IXH8 852 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 KCNRGQ8N5I3 272 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 LFNGQ8NES3 379 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 BCL2L10Q9HD36 194 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 ZC3H12DA2A288 527 aaKnown RBP11.83□□□□□ -0.52
COL3A1-201ENST00000304636 P2RY10O00398 339 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 TAAR5O14804 337 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 ZDHHC11BP0C7U3 371 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 GLYR1Q49A26 553 aaPredicted RBP11.83□□□□□ -0.52
COL3A1-201ENST00000304636 GLCCI1Q86VQ1 547 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 WDFY2Q96P53 400 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 DUSP22Q9NRW4 184 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 RNF186Q9NXI6 227 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 TP53TG5Q9Y2B4 290 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 PIAS3Q9Y6X2 628 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 TMEM202A6NGA9 273 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 ANKRD30BLA7E2S9 258 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 SLC2A10O95528 541 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 TSPAN12O95859 305 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 SOD1P00441 154 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 CHRM2P08172 466 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 ZNF728P0DKX0 622 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 NID1P14543 1247 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 SLC36A2Q495M3 483 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 CLLU1Q5K131 121 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 TANGO2Q6ICL3 276 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 C17orf107Q6ZR85 190 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 MKXQ8IYA7 352 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 TMEFF1Q8IYR6 380 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 SGK3Q96BR1 496 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 SLC22A12Q96S37 553 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 ULBP3Q9BZM4 244 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 GPR171O14626 319 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 SCGB1D1O95968 90 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 PLPP6Q8IY26 295 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 CMTM4Q8IZR5 234 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 OR2L13Q8N349 312 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 MAP6Q96JE9 813 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 ZMAT3Q9HA38 289 aaKnown RBP11.83□□□□□ -0.52
COL3A1-201ENST00000304636 MARCH5Q9NX47 278 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 HCSTQ9UBK5 93 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 OR52A1Q9UKL2 312 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 SRPK3Q9UPE1 567 aa11.83□□□□□ -0.52
COL3A1-201ENST00000304636 YY2O15391 372 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 TMEM127O75204 238 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 CD1EP15812 388 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 ERV3-1Q14264 604 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 KIAA0895LQ68EN5 471 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 SSX9Q7RTT3 188 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 MISPQ8IVT2 679 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 WFDC5Q8TCV5 224 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 SAGE1Q9NXZ1 904 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 CCSO14618 274 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 SCO1O75880 301 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 CPT2P23786 658 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 UBE2NP61088 152 aaKnown RBP11.82□□□□□ -0.52
COL3A1-201ENST00000304636 MSMO1Q15800 293 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 LIPNQ5VXI9 398 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 OR14A16Q8NHC5 309 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 RSC1A1Q92681 617 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 RAB39BQ96DA2 213 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 C19orf43Q9BQ61 176 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 PURGQ9UJV8 347 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms