RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 TSEN54Q7Z6J9 526 aaKnown RBP13.2□□□□□ -0.3
HIPK3-201ENST00000303296 NHLH1Q02575 133 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 NHLH2Q02577 135 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 FER1L6-AS2Q96M78 137 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 PLEKHF2Q9H8W4 249 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 SIX2Q9NPC8 291 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 PCM1Q15154 2024 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 CLDN8P56748 225 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 GAMTQ14353 236 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 RBMS2Q15434 407 aaKnown RBP13.2□□□□□ -0.3
HIPK3-201ENST00000303296 RGNQ15493 299 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 KCNRGQ8N5I3 272 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 MTMR14Q8NCE2 650 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 IGSF8Q969P0 613 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 MRPS24Q96EL2 167 aaKnown RBP13.2□□□□□ -0.3
HIPK3-201ENST00000303296 SPAG17Q6Q759 2223 aa13.2□□□□□ -0.3
HIPK3-201ENST00000303296 LY86O95711 162 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 CPZQ66K79 652 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 MEPCEQ7L2J0 689 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 INTS6Q9UL03 887 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 MDC1Q14676 2089 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 A0A0G2JLL6 359 aaPredicted RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 TMX2-CTNND1H3BSU7 103 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 CEACAM7Q14002 265 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 DOK3Q7L591 496 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 PRRT2Q7Z6L0 340 aaPredicted RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 MOB3BQ86TA1 216 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 SMAP2Q8WU79 429 aaPredicted RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 NOX4Q9NPH5 578 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 OR52A1Q9UKL2 312 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 TMEM72A0PK05 275 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 RFC3P40938 356 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 GIPRP48546 466 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 TPPP2P59282 170 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 LCORQ96JN0 433 aaPredicted RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 SLC6A18Q96N87 628 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 UGT2A1Q9Y4X1 527 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 AUP1Q9Y679 476 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 CEPT1Q9Y6K0 416 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 PRAMEF26H0Y7S4 382 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 IAPPP10997 89 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 SNRPBP14678 240 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 ARSAP15289 507 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 LBX1P52954 281 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 PCBP3P57721 371 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 SELENOWP63302 87 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 RPE65Q16518 533 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 ZNF239Q16600 458 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 DCAF12L1Q5VU92 463 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 TRILQ7L0X0 811 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 IGDCC3Q8IVU1 814 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 CMASQ8NFW8 434 aaPredicted RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 IMP4Q96G21 291 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 AK3Q9UIJ7 227 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 ADAM29Q9UKF5 820 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 EIF3FO00303 357 aaPredicted RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 ABCD3P28288 659 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 SLC35E4Q6ICL7 350 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 LCN15Q6UWW0 184 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 PIWIL3Q7Z3Z3 882 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 OR6V1Q8N148 313 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 RNF141Q8WVD5 230 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 ASB17Q8WXJ9 295 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 SLC22A7Q9Y694 548 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 SNRNP200O75643 2136 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 J3KRW8 73 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 HNRNPH3P31942 346 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 SLC25A11Q02978 314 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 NFATC3Q12968 1075 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 MFAP5Q13361 173 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 CLSTN3Q9BQT9 956 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 NTMT1Q9BV86 223 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 SEZ6LQ9BYH1 1024 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 MKRN2Q9H000 416 aaKnown RBP13.19□□□□□ -0.3
HIPK3-201ENST00000303296 POPDC3Q9HBV1 291 aa13.19□□□□□ -0.3
HIPK3-201ENST00000303296 RBP4P02753 201 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 OR10A3P58181 314 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 GABARAPL2P60520 117 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 DUSP2Q05923 314 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 ZNF573Q86YE8 665 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 ACOT4Q8N9L9 421 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 OR5M8Q8NGP6 311 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 OR10Z1Q8NGY1 313 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 MRGPRX2Q96LB1 330 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 DEFB127Q9H1M4 99 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 CLTCL1P53675 1640 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 S1PR4O95977 384 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 Q56UQ5 140 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 CHST14Q8NCH0 376 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 SYT17Q9BSW7 474 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 SLC23A1Q9UHI7 598 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 SCML1Q9UN30 329 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 GPR17Q13304 367 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 BET1LQ9NYM9 111 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 J3KTA2 159 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 GABRPO00591 440 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 NUDT3O95989 172 aa13.18□□□□□ -0.3
HIPK3-201ENST00000303296 GCGP01275 180 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms