RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 GIPRP48546 466 aa21.75■■□□□ 1.07
U2AF1-201ENST00000291552 ZP4Q12836 540 aa21.75■■□□□ 1.07
U2AF1-201ENST00000291552 MELKQ14680 651 aa21.75■■□□□ 1.07
U2AF1-201ENST00000291552 VMACQ2NL98 169 aa21.75■■□□□ 1.07
U2AF1-201ENST00000291552 TRMT5Q32P41 509 aaKnown RBP21.75■■□□□ 1.07
U2AF1-201ENST00000291552 IL17RELQ6ZVW7 336 aa21.75■■□□□ 1.07
U2AF1-201ENST00000291552 OR6X1Q8NH79 312 aa21.75■■□□□ 1.07
U2AF1-201ENST00000291552 BEX2Q9BXY8 128 aa21.75■■□□□ 1.07
U2AF1-201ENST00000291552 LOC100289279A0A1B0GTE1 492 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 SH3PXD2BA1X283 911 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 PHF1O43189 567 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-201ENST00000291552 SASH3O75995 380 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 PATE4P0C8F1 98 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 PTDSS1P48651 473 aaKnown RBP21.74■■□□□ 1.07
U2AF1-201ENST00000291552 RABL3Q5HYI8 236 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 NANOGP8Q6NSW7 305 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 TTC33Q6PID6 262 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-201ENST00000291552 LRFN4Q6PJG9 635 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 CCDC80Q76M96 950 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 CALHM3Q86XJ0 350 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 ZNF584Q8IVC4 421 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 MRPL24Q96A35 216 aaKnown RBP21.74■■□□□ 1.07
U2AF1-201ENST00000291552 SHARPINQ9H0F6 387 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 CHODLQ9H9P2 273 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 NANOGQ9H9S0 305 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 DYNLRB1Q9NP97 96 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 MEPEQ9NQ76 525 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-201ENST00000291552 GLTPQ9NZD2 209 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 LPAR3Q9UBY5 353 aa21.74■■□□□ 1.07
U2AF1-201ENST00000291552 FBXO9Q9UK97 447 aaPredicted RBP21.74■■□□□ 1.07
U2AF1-201ENST00000291552 LRP5LA4QPB2 252 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 ADRA2AP08913 450 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 ASAH2BP0C7U1 165 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 RAB1AP62820 205 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 FXNQ16595 210 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 IQCCQ4KMZ1 466 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 FAM166AQ6J272 317 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 SKA3Q8IX90 412 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 NEU4Q8WWR8 484 aaPredicted RBP21.73■■□□□ 1.07
U2AF1-201ENST00000291552 MPP4Q96JB8 637 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 SIKE1Q9BRV8 207 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 TMEM120AQ9BXJ8 343 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 TPK1Q9H3S4 243 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 NANSQ9NR45 359 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 ZNF229Q9UJW7 825 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 CMAHPQ9Y471 501 aa21.73■■□□□ 1.07
U2AF1-201ENST00000291552 LILRA1O75019 489 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 OR6A2O95222 327 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 PGA4P0DJD7 388 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 PGA3P0DJD8 388 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 TNFRSF1BP20333 461 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 IL2RGP31785 369 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 RAB39AQ14964 217 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 INTS11Q5TA45 600 aaKnown RBP21.72■■□□□ 1.07
U2AF1-201ENST00000291552 METTL21CQ5VZV1 264 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 SNX32Q86XE0 403 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 ZNF786Q8N393 782 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 SLC19A3Q9BZV2 496 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 MYEF2Q9P2K5 600 aaKnown RBP21.72■■□□□ 1.07
U2AF1-201ENST00000291552 KCNS2Q9ULS6 477 aa21.72■■□□□ 1.07
U2AF1-201ENST00000291552 VSTM5A8MXK1 200 aa21.71■■□□□ 1.07
U2AF1-201ENST00000291552 LYNX1G3V0Z9 82 aa21.71■■□□□ 1.07
U2AF1-201ENST00000291552 RAB36O95755 333 aa21.71■■□□□ 1.07
U2AF1-201ENST00000291552 TACSTD2P09758 323 aa21.71■■□□□ 1.07
U2AF1-201ENST00000291552 LYNX1P0DP58 116 aa21.71■■□□□ 1.07
U2AF1-201ENST00000291552 RIN1Q13671 783 aa21.71■■□□□ 1.07
U2AF1-201ENST00000291552 FAM120AOSQ5T036 256 aa21.71■■□□□ 1.07
U2AF1-201ENST00000291552 PIWIL3Q7Z3Z3 882 aaKnown RBP21.71■■□□□ 1.07
U2AF1-201ENST00000291552 LRP11Q86VZ4 500 aa21.71■■□□□ 1.07
U2AF1-201ENST00000291552 SLC26A7Q8TE54 656 aa21.71■■□□□ 1.07
U2AF1-201ENST00000291552 REPIN1Q9BWE0 567 aaKnown RBP21.71■■□□□ 1.07
U2AF1-201ENST00000291552 DENND2DQ9H6A0 471 aaPredicted RBP21.71■■□□□ 1.07
U2AF1-201ENST00000291552 TMEM38BQ9NVV0 291 aa21.71■■□□□ 1.07
U2AF1-201ENST00000291552 RNF13O43567 381 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 UBL3O95164 117 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 GLRXP35754 106 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 UGT2B15P54855 530 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 RUNX1T1Q06455 604 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 CGB2Q6NT52 195 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 CARM1Q86X55 608 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 NKAIN4Q8IVV8 208 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 SLC22A24Q8N4F4 322 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 ZNF540Q8NDQ6 660 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 PFN4Q8NHR9 129 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 UBASH3BQ8TF42 649 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 ZNF566Q969W8 418 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 SLC25A44Q96H78 314 aaPredicted RBP21.7■■□□□ 1.06
U2AF1-201ENST00000291552 SYT3Q9BQG1 590 aa21.7■■□□□ 1.06
U2AF1-201ENST00000291552 DHHO43323 396 aa21.69■■□□□ 1.06
U2AF1-201ENST00000291552 SYNGR3O43761 229 aa21.69■■□□□ 1.06
U2AF1-201ENST00000291552 EVX1P49640 407 aa21.69■■□□□ 1.06
U2AF1-201ENST00000291552 TRIP10Q15642 601 aa21.69■■□□□ 1.06
U2AF1-201ENST00000291552 NANOGNBQ7Z5D8 188 aa21.69■■□□□ 1.06
U2AF1-201ENST00000291552 PAQR4Q8N4S7 273 aaPredicted RBP21.69■■□□□ 1.06
U2AF1-201ENST00000291552 TMEM158Q8WZ71 300 aa21.69■■□□□ 1.06
U2AF1-201ENST00000291552 LRRC58Q96CX6 371 aa21.69■■□□□ 1.06
U2AF1-201ENST00000291552 SH3GL3Q99963 347 aa21.69■■□□□ 1.06
U2AF1-201ENST00000291552 FZR1Q9UM11 496 aa21.69■■□□□ 1.06
U2AF1-201ENST00000291552 SHOX2O60902 331 aaPredicted RBP21.68■■□□□ 1.06
U2AF1-201ENST00000291552 TGFAP01135 160 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms