RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 DEFB133Q30KQ1 61 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 GPR139Q6DWJ6 353 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 TMEM225Q6GV28 225 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 SLC35D2Q76EJ3 337 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 GOT1L1Q8NHS2 421 aaPredicted RBP11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 RSC1A1Q92681 617 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 ZNF587Q96SQ5 575 aaPredicted RBP11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 TMEM43Q9BTV4 400 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 PATZ1Q9HBE1 687 aaKnown RBP11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 A0A0A6YYJ9 748 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 TRDV1A0A1B0GX56 115 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 CCSO14618 274 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 CDK2P24941 298 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 CD80P33681 288 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 TAS2R19P59542 299 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 SPOCK1Q08629 439 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 OR10K2Q6IF99 312 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 PRSS42Q7Z5A4 293 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 NAA40Q86UY6 237 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 FAM213BQ8TBF2 198 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 LRRC3BQ96PB8 259 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 SYT3Q9BQG1 590 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 KCNS2Q9ULS6 477 aa11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.55□□□□□ -0.56
SLC6A1-201ENST00000287766 SYT5O00445 386 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 STK17BO94768 372 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 TMEM225BP0DP42 221 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 MSR1P21757 451 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 GPR50Q13585 617 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 TMEM41BQ5BJD5 291 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 CARD17Q5XLA6 110 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 FBXO46Q6PJ61 603 aaPredicted RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 ZNF620Q6ZNG0 422 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 SLC38A6Q8IZM9 456 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 HSD17B11Q8NBQ5 300 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 DNAAF1Q8NEP3 725 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 FAM3CQ92520 227 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 RASD2Q96D21 266 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 TOE1Q96GM8 510 aaKnown RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 DOCK6Q96HP0 2047 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 TEAD3Q99594 435 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 HCAR1Q9BXC0 346 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 NRSN2Q9GZP1 204 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 CHRDQ9H2X0 955 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 PIGMQ9H3S5 423 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 A0A0J9YY10 115 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 OTOL1A6NHN0 477 aaPredicted RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 RAB40ALP0C0E4 278 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 JMJD7P0C870 316 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 TRHRP34981 398 aaPredicted RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 HNF4GQ14541 408 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 CCDC190Q86UF4 302 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 LILRB2Q8N423 598 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 RAB40AQ8WXH6 277 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 GCDHQ92947 438 aaPredicted RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 KIAA1143Q96AT1 154 aaPredicted RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 BORCS8Q96FH0 119 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 SRRQ9GZT4 340 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 SCPEP1Q9HB40 452 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 RGPD3A6NKT7 1758 aaPredicted RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 RGPD4Q7Z3J3 1758 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 TMEM129A0AVI4 362 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 GREM1O60565 184 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 CRTAPO75718 401 aaPredicted RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 GNB3P16520 340 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 CLPPQ16740 277 aaPredicted RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 TMEM240Q5SV17 173 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 TMEM151BQ8IW70 566 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 OR1M1Q8NGA1 313 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 ANGPTL6Q8NI99 470 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 TMED6Q8WW62 240 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 DAPP1Q9UN19 280 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 FLVCR2Q9UPI3 526 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 RNF215Q9Y6U7 377 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 NRG2O14511 850 aaPredicted RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 DIRAS3O95661 229 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 IGHA2P01877 340 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 CEACAM5P06731 702 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 INHBBP09529 407 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 CPEP16870 476 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 SPI1P17947 270 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 EPHA1P21709 976 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 CCR9P51686 369 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 CLINT1Q14677 625 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 BCL2A1Q16548 175 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 POC1BQ8TC44 478 aa11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 RPP25Q9BUL9 199 aaKnown RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 EXO1Q9UQ84 846 aaKnown RBP11.54□□□□□ -0.56
SLC6A1-201ENST00000287766 M0QYG6 137 aa11.53□□□□□ -0.56
SLC6A1-201ENST00000287766 NAT2P11245 290 aa11.53□□□□□ -0.56
SLC6A1-201ENST00000287766 ETV6P41212 452 aa11.53□□□□□ -0.56
SLC6A1-201ENST00000287766 ADPRHP54922 357 aa11.53□□□□□ -0.56
SLC6A1-201ENST00000287766 RSU1Q15404 277 aa11.53□□□□□ -0.56
SLC6A1-201ENST00000287766 YOD1Q5VVQ6 348 aaPredicted RBP11.53□□□□□ -0.56
SLC6A1-201ENST00000287766 TEX261Q6UWH6 196 aa11.53□□□□□ -0.56
SLC6A1-201ENST00000287766 PGAM5Q96HS1 289 aa11.53□□□□□ -0.56
SLC6A1-201ENST00000287766 RADILQ96JH8 1075 aa11.53□□□□□ -0.56
SLC6A1-201ENST00000287766 FAM71F1Q96KD3 344 aaPredicted RBP11.53□□□□□ -0.56
SLC6A1-201ENST00000287766 HHIPQ96QV1 700 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms