RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SGTBQ96EQ0 304 aa12.52□□□□□ -0.41
HMGN3-201ENST00000275036 PRRC1Q96M27 445 aa12.52□□□□□ -0.41
HMGN3-201ENST00000275036 ADAD1Q96M93 576 aaKnown RBP12.52□□□□□ -0.41
HMGN3-201ENST00000275036 HS6ST2Q96MM7 605 aa12.52□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF75AQ96N20 296 aa12.52□□□□□ -0.41
HMGN3-201ENST00000275036 B3GAT2Q9NPZ5 323 aa12.52□□□□□ -0.41
HMGN3-201ENST00000275036 MAN2C1Q9NTJ4 1040 aa12.52□□□□□ -0.41
HMGN3-201ENST00000275036 GLTPQ9NZD2 209 aa12.52□□□□□ -0.41
HMGN3-201ENST00000275036 ABCD2Q9UBJ2 740 aa12.52□□□□□ -0.41
HMGN3-201ENST00000275036 ADAM21Q9UKJ8 722 aa12.52□□□□□ -0.41
HMGN3-201ENST00000275036 H7C417 338 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 LY6HO94772 140 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 CRYAAP02489 173 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 HIST1H2ABP04908 130 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 F13BP05160 661 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 PGA4P0DJD7 388 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 PGA3P0DJD8 388 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 NCK1P16333 377 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 PAX7P23759 505 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 AQP2P41181 271 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 CAPZA2P47755 286 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 PSME3P61289 254 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 HGFACQ04756 655 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 RUNX1T1Q06455 604 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 NPRL3Q12980 569 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 SWI5Q1ZZU3 235 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 LRFN4Q6PJG9 635 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF813Q6ZN06 617 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 HIST3H2AQ7L7L0 130 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 TSEN54Q7Z6J9 526 aaKnown RBP12.51□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF525Q8N782 197 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 RBM15BQ8NDT2 890 aaKnown RBP12.51□□□□□ -0.41
HMGN3-201ENST00000275036 MOSPD2Q8NHP6 518 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 FGFBP3Q8TAT2 258 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 LIPHQ8WWY8 451 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 HIST1H2ACQ93077 130 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 SLC25A44Q96H78 314 aaPredicted RBP12.51□□□□□ -0.41
HMGN3-201ENST00000275036 MS4A3Q96HJ5 214 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 FOXB1Q99853 325 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 CA10Q9NS85 328 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 RHCGQ9UBD6 479 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 POFUT2Q9Y2G5 429 aa12.51□□□□□ -0.41
HMGN3-201ENST00000275036 IGHV2OR16-5A0A0B4J2B6 119 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 GMNCA6NCL1 334 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 KIAA1324LA8MWY0 1029 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-201ENST00000275036 GSTA4O15217 222 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 GPRIN2O60269 458 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 PRSS23O95084 383 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF682O95780 498 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 SERPINA1P01009 418 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 PRDX6P30041 224 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 ARR3P36575 388 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 NUDT6P53370 316 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 PIGFQ07326 219 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 ST3GAL3Q11203 375 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 ADIPOQQ15848 244 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 MEX3DQ86XN8 651 aaKnown RBP12.5□□□□□ -0.41
HMGN3-201ENST00000275036 OFCC1Q8IZS5 231 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 OR10H5Q8NGA6 315 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 LZICQ8WZA0 190 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF566Q969W8 418 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 CMTM5Q96DZ9 223 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 FBXO17Q96EF6 278 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 HSH2DQ96JZ2 352 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 KCTD14Q9BQ13 255 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-201ENST00000275036 KCNS3Q9BQ31 491 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 BARX1Q9HBU1 254 aaPredicted RBP12.5□□□□□ -0.41
HMGN3-201ENST00000275036 MED31Q9Y3C7 131 aa12.5□□□□□ -0.41
HMGN3-201ENST00000275036 SVEP1Q4LDE5 3571 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 BCL10O95999 233 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 IFNW1P05000 195 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 PATE4P0C8F1 98 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 CD79AP11912 226 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF14P17017 642 aaPredicted RBP12.49□□□□□ -0.41
HMGN3-201ENST00000275036 MAKP20794 623 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 GNGT1P63211 74 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 MYBPC1Q00872 1141 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 HIST3H3Q16695 136 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 GSG1Q2KHT4 349 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 IFI44LQ53G44 452 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 VHLLQ6RSH7 139 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 CPLX4Q7Z7G2 160 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 SKA3Q8IX90 412 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 CCDC36Q8IYA8 594 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 NUP37Q8NFH4 326 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 GEMIN6Q8WXD5 167 aaKnown RBP12.49□□□□□ -0.41
HMGN3-201ENST00000275036 ASB10Q8WXI3 467 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
HMGN3-201ENST00000275036 ZNF347Q96SE7 839 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 SEPHS2Q99611 448 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 MRPL13Q9BYD1 178 aaKnown RBP12.49□□□□□ -0.41
HMGN3-201ENST00000275036 NSRP1Q9H0G5 558 aaKnown RBP12.49□□□□□ -0.41
HMGN3-201ENST00000275036 MOV10Q9HCE1 1003 aaKnown RBP12.49□□□□□ -0.41
HMGN3-201ENST00000275036 INIPQ9NRY2 104 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 EGFL7Q9UHF1 273 aa12.49□□□□□ -0.41
HMGN3-201ENST00000275036 MALRD1Q5VYJ5 2156 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 DHHO43323 396 aa12.48□□□□□ -0.41
HMGN3-201ENST00000275036 TRMUO75648 421 aaKnown RBP12.48□□□□□ -0.41
HMGN3-201ENST00000275036 QDPRP09417 244 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms